Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1706 |
Symbol | |
ID | 6198978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1926796 |
End bp | 1927980 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641705697 |
Product | major facilitator transporter |
Protein accession | YP_001832825 |
Protein GI | 182678679 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.21366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCTCG CTCTTTTCGC GCTGGCCTTG GCTTCCTTTG GTATTGGGAC GAGTGAATTC GTCATCATGG GCATCTTGCC GGAAATCGCC CGTGATCTCA CGGTGACGAT TCCGCAAGCC GGTCTCCTGG TGACTGCCTA TGCCCTGACG GTGACATTCG CGGGGCCGGT CGTTGCTCTG CTGGCGGCTC GTCTGCCGCA AAAAACCGCC TTGCTCGGGC TTCTCTGCCT GTTTCTCCTC GGCAATCTTT TTTGTGCCCT GGCGCCGCAA TTTTCTCTTC TCTTGATAGC GCGGATCTTC ACGGCTCTCG CCCATGCGGC CTTTTACGGA AATGGCGTCG TCGTCGCCGC GAGCTTGGTT CCGCCCCATC GCCGCAGTCA GGCGATCGCC TTGATGTTTT CAGGAATGAC ATTGGCCAAT ATTATTGGTG TCCCGGTCGG CACGATGATC GGCCTCGCAC AAGGTTGGCG TGCGACATTC TGGGCGATTA TTCCTTTCCT TGGTGTGGCC GGCATTGCCT TGGCCATTCT GTTGCCGAGG AAAGGTCAGG AGAGAGCGGC TGGCCGTTTG GTCGATGAAT TGATCGTCTT GCGCCGGCCG CAGGTCCTGC TGACACTTTT AGCCAGTGTC TTTATCGCCG CGAGCCTGTT CTGTGTCTTG ACCTATATTT CGCCTCTGCT CGCCACCGTG ACGGGCATGG ATGAAACCCA GATTTCGAGC GCGCTTCTGC TCTTTGGTGG TGGAACCTTT TTCGGCATTT TTGTCGGTGG CCGGCTGGCG GATTGGCGCC AAATGACGAC GATCGTCGGG ACATTTGTCG TACTCGGTGC CCTTTATGCG GTCTTCGCGT TTTCTGCTAC TTCTATCCCG TCCACCTATC TGACCATTTT TCTGCTGGGT TTCGTCAGTT TCGCGAATGG CCCTGGCATG CAGGCGCGGG TTATCGACAA GGCAAGCGAG GCACCCAATA TTGGAGCCTC ATTGATTCAC AGTTCCTATA ATTTTGGCAA TGGCGCCGGG GCTTGGCTGG GTGGCGCGGC CTTGGCCTCG GGCATGAGCT ATGGACATTT GCCCTGGCTT TCCGTCGGCT TGGTGGTGGC AGCCTTGGCG ACGCTCGGCA TCGCCCATGA ACTCGAACGC AATGCCGAGA ATGCCGGAGG TCTCGATCCG GAGGCCTTGT CCTGA
|
Protein sequence | MPLALFALAL ASFGIGTSEF VIMGILPEIA RDLTVTIPQA GLLVTAYALT VTFAGPVVAL LAARLPQKTA LLGLLCLFLL GNLFCALAPQ FSLLLIARIF TALAHAAFYG NGVVVAASLV PPHRRSQAIA LMFSGMTLAN IIGVPVGTMI GLAQGWRATF WAIIPFLGVA GIALAILLPR KGQERAAGRL VDELIVLRRP QVLLTLLASV FIAASLFCVL TYISPLLATV TGMDETQISS ALLLFGGGTF FGIFVGGRLA DWRQMTTIVG TFVVLGALYA VFAFSATSIP STYLTIFLLG FVSFANGPGM QARVIDKASE APNIGASLIH SSYNFGNGAG AWLGGAALAS GMSYGHLPWL SVGLVVAALA TLGIAHELER NAENAGGLDP EALS
|
| |