Gene Bind_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1706 
Symbol 
ID6198978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1926796 
End bp1927980 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content58% 
IMG OID641705697 
Productmajor facilitator transporter 
Protein accessionYP_001832825 
Protein GI182678679 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.21366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCG CTCTTTTCGC GCTGGCCTTG GCTTCCTTTG GTATTGGGAC GAGTGAATTC 
GTCATCATGG GCATCTTGCC GGAAATCGCC CGTGATCTCA CGGTGACGAT TCCGCAAGCC
GGTCTCCTGG TGACTGCCTA TGCCCTGACG GTGACATTCG CGGGGCCGGT CGTTGCTCTG
CTGGCGGCTC GTCTGCCGCA AAAAACCGCC TTGCTCGGGC TTCTCTGCCT GTTTCTCCTC
GGCAATCTTT TTTGTGCCCT GGCGCCGCAA TTTTCTCTTC TCTTGATAGC GCGGATCTTC
ACGGCTCTCG CCCATGCGGC CTTTTACGGA AATGGCGTCG TCGTCGCCGC GAGCTTGGTT
CCGCCCCATC GCCGCAGTCA GGCGATCGCC TTGATGTTTT CAGGAATGAC ATTGGCCAAT
ATTATTGGTG TCCCGGTCGG CACGATGATC GGCCTCGCAC AAGGTTGGCG TGCGACATTC
TGGGCGATTA TTCCTTTCCT TGGTGTGGCC GGCATTGCCT TGGCCATTCT GTTGCCGAGG
AAAGGTCAGG AGAGAGCGGC TGGCCGTTTG GTCGATGAAT TGATCGTCTT GCGCCGGCCG
CAGGTCCTGC TGACACTTTT AGCCAGTGTC TTTATCGCCG CGAGCCTGTT CTGTGTCTTG
ACCTATATTT CGCCTCTGCT CGCCACCGTG ACGGGCATGG ATGAAACCCA GATTTCGAGC
GCGCTTCTGC TCTTTGGTGG TGGAACCTTT TTCGGCATTT TTGTCGGTGG CCGGCTGGCG
GATTGGCGCC AAATGACGAC GATCGTCGGG ACATTTGTCG TACTCGGTGC CCTTTATGCG
GTCTTCGCGT TTTCTGCTAC TTCTATCCCG TCCACCTATC TGACCATTTT TCTGCTGGGT
TTCGTCAGTT TCGCGAATGG CCCTGGCATG CAGGCGCGGG TTATCGACAA GGCAAGCGAG
GCACCCAATA TTGGAGCCTC ATTGATTCAC AGTTCCTATA ATTTTGGCAA TGGCGCCGGG
GCTTGGCTGG GTGGCGCGGC CTTGGCCTCG GGCATGAGCT ATGGACATTT GCCCTGGCTT
TCCGTCGGCT TGGTGGTGGC AGCCTTGGCG ACGCTCGGCA TCGCCCATGA ACTCGAACGC
AATGCCGAGA ATGCCGGAGG TCTCGATCCG GAGGCCTTGT CCTGA
 
Protein sequence
MPLALFALAL ASFGIGTSEF VIMGILPEIA RDLTVTIPQA GLLVTAYALT VTFAGPVVAL 
LAARLPQKTA LLGLLCLFLL GNLFCALAPQ FSLLLIARIF TALAHAAFYG NGVVVAASLV
PPHRRSQAIA LMFSGMTLAN IIGVPVGTMI GLAQGWRATF WAIIPFLGVA GIALAILLPR
KGQERAAGRL VDELIVLRRP QVLLTLLASV FIAASLFCVL TYISPLLATV TGMDETQISS
ALLLFGGGTF FGIFVGGRLA DWRQMTTIVG TFVVLGALYA VFAFSATSIP STYLTIFLLG
FVSFANGPGM QARVIDKASE APNIGASLIH SSYNFGNGAG AWLGGAALAS GMSYGHLPWL
SVGLVVAALA TLGIAHELER NAENAGGLDP EALS