| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1481 |
|---|
| Symbol | |
|---|
| ID | 6199144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1685893 |
|---|
| End bp | 1686798 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641705471 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001832604 |
|---|
| Protein GI | 182678458 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.354725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG ACCTCAACGA CTATGCCTAT TTTGCCGAGG TTGTCGCCCA TGGCGGGTTT
GCCGCAGCTG GGCGCGCGCT CCGCGAGCCA AAGTCCAAGC TCAGCCGGCG CATTGCTGGG
TTGGAGGATC GGTTGGGACT GCGCTTGATA GAGCGGTCCA GCAGGCGCTT TCGCGTGACA
GACACGGGCC AGGCCTTTTA CGAGAGATGC CGGGCGATGC TGGCCGAGGC GGAGCAGGCG
GAGGCATTGG TCATGCAGGC TCAGGCCGAG CCCCATGGTC GCATCCGATT CAGCTGCCCG
ACGGGCATGC TGGAGCCGAT CTCGGGCCTG ATCTCGTCTT TCCTGGTCCG CTATCCGAAG
GTGCGGCTCC AGCTCGTGGC AACGGATCGG GCACTCAACC TGATCGAGGA ACGGATCGAT
CTGGCACTCC GGGTGCGCGG GAGCCTTACC AGCGACGCCG CGCTGACAAT GCGATCACTC
GGCCTATCCA CCCGCATCCT CGTCGCCAGC CCCCTGATCG CCAGCCAGGT GGGAAGCATC
GAGCAATTGG CCTTATTCCC CGCTTTGGCG ACCAATGACA CGGCGGACGA TCTCGAATGG
CACCTGGAAA CGGAAGACGG CCTCAAGCAG GTCATCCGCG TTGAACCGCG AATGGGATGC
GAGGACATGG CCACCGTGCG CGCCGCCGCC ATCGACGGCA TCGGGGTGGC GATTCTGCCC
GATCATGTCT GTCTTGATGC ATTGGAAGCG GGACGCCTGG TGCGCGTGCT GCCGGCATGG
CGCGGACTAC AGGGGATCGT GCATCTCGTC TTCACGACCC GGCGCGGTTT GCCACCGGCC
GTCCGCGCAC TCATTGACCA TCTGGCTGCC GGCTTTCCGC GCGACGTCTT GGGGAAGAAT
GCGTAA
|
|---|
| Protein sequence | MKIDLNDYAY FAEVVAHGGF AAAGRALREP KSKLSRRIAG LEDRLGLRLI ERSSRRFRVT
DTGQAFYERC RAMLAEAEQA EALVMQAQAE PHGRIRFSCP TGMLEPISGL ISSFLVRYPK
VRLQLVATDR ALNLIEERID LALRVRGSLT SDAALTMRSL GLSTRILVAS PLIASQVGSI
EQLALFPALA TNDTADDLEW HLETEDGLKQ VIRVEPRMGC EDMATVRAAA IDGIGVAILP
DHVCLDALEA GRLVRVLPAW RGLQGIVHLV FTTRRGLPPA VRALIDHLAA GFPRDVLGKN
A
|
|---|
| |