| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1256 |
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| Symbol | rpsD |
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| ID | 6200098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 1456889 |
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| End bp | 1457506 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641705249 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001832386 |
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| Protein GI | 182678240 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.966031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.108405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAAGC GCGCAGAAGC GAAGTATAAA ATCGACCGCC GCATGGGCCA GAACATCTGG
GGCCGGTCGA AGAGCCCGGT TAACCGTCGT GAATATGGAC CCGGCCAGCA CGGCCAGCGG
CGTAAGGGCA AGCTGTCGGA TTTCGGCACC CAGCTCAAGG CCAAGCAGAA GCTGAAAGGC
TATTACGGCA ATATTTCGGA GAAACAGTTC CGGAAATATT ACGCTGAAGC CATCCGTATG
AAGGGCGACT CCGGTGATAA TCTCATCGGT CTTCTCGAGC GCCGCCTGGA TGCCGTGGTC
TATCGCGCGA AATTCGTGCC GACCGTGTTC GCCTCGCGTC AGTTCATCAA TCACGGCCAT
ATCAAGGTCA ATGGCCGCCG CGTGAACATC GCCTCCTATC AGGTCCGCGT CGGCGACGTG
ATCGAGGTCA AGGAAGCTTC GCGTCAATTG ACTCTGGTTC TGGAAGCATC GCAGCTCGCC
GAACGTGACG TGCCGGAATA TTATGATGTC GATCACGGGA AGATGAGTGC AAAGGTGACC
CGCATTCCCT TGCCGAACGA GGTTCCCTAT CCGGTGATCA TGGAACCCAA TCTCGTGATC
GAGTTCTATT CCCGCTGA
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| Protein sequence | MTKRAEAKYK IDRRMGQNIW GRSKSPVNRR EYGPGQHGQR RKGKLSDFGT QLKAKQKLKG
YYGNISEKQF RKYYAEAIRM KGDSGDNLIG LLERRLDAVV YRAKFVPTVF ASRQFINHGH
IKVNGRRVNI ASYQVRVGDV IEVKEASRQL TLVLEASQLA ERDVPEYYDV DHGKMSAKVT
RIPLPNEVPY PVIMEPNLVI EFYSR
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