Gene Bind_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1033 
Symbol 
ID6198683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1183796 
End bp1184998 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content58% 
IMG OID641705025 
Productpolysaccharide export protein 
Protein accessionYP_001832165 
Protein GI182678019 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGT TTCGATGGGT TGCTTTGACC AGCCTAGCAA TTGGCCTCCT TCCTGCCGGA 
GGCTGTGCCT TTTTCCCGGT GAGCGGACCT TCCTCCGCTA GCATCAACGC GCAATCCTCC
CCAACAAGCC CTTACGGGCT CGTCCCCCTG ACACCCGAAA CGATCGATGT GATCGCCGCC
TTTGAACCCA AAGGGTTGGC CGGCACGTTC ACGGACAGGC GGCCCTCTTC GAACATCAAA
TTCGGCGTCG GCGATATCGT CAGTGTCACT GTTTTCGAAG CGGCAGCAGG GGGCCTCTAC
ATTCCGCTCG AGGCCGGTGT AAGGCCGGGT AATTACGTCG CCTTGCCAGA CCAAGTCGTC
GATAATGATG GCAACATCAC TGTCCCCTAC GCCGGTGCTA TCCGCGCCGC AGGCCGCACC
AATGTGCAAA TTCAGAACGA TATTATAGCC CGCATCAAGA ATCGGGCGAT CGAGCCGCAG
GTCGTCGTCG CGCTGTCACA GCAGCGTACC TCTTTGATCA GCATCATTGG CGAGGTTAAT
ACGCCTTTGC GCTTTGCCAT GCCCGCCGCG GGTGCTGGCG ATCGCATTCT CGATGCAATC
ACGCGCGCTG GCGGCATCAA GGGCCAGGGT TACGAGACCT GGGTCATGCT CGAACGCGAC
CATCGCCGCG CGACAGTGCC GTTCGAAAAT CTCGTGATGA ATGCGTCGAA CAATATTTTC
GTGCAGCCCG GCGATCGCAT CTATGTCTAT CGCGAGCAGC AAAAATTCCT CGCTTTTGGC
GCGACTGGAA ACCAAGGCGA GTTCCCGTTC GATGCCTGGC GCATCAATCT AGCGGAAGCC
GTAGCCAAGG CGGCGGGTCT CGTCGATCAG CAGGCCGACG CGACCTCCAT CTATCTCTAT
CGGCGTGAAC CGCGCGAAGT GGCGCGGCGG CTCGGCATTG ACGTCAACAA TATTCACGAC
GAGCTCGTGC CTGTCATCTT TACAGTCAAT CTTCGTGATC CGGGTGGCTA TTTCCTCGCG
ACACGATTGC AAGTGCGCAA TCAGGACATT CTCTTCGTCG CCAACGCCCA ATCCTATGAG
ATTGATAAGT TCCTCTCCTT CGTCAATCAC GTTGCCGTTA CCGCTCATTC CATCGAGAGT
CCCATCGCCG GAGCTTCCAT TACTCGGGCC GATGTCGCCG GTCACGCGGT TGTTGCACCG
TAA
 
Protein sequence
MSAFRWVALT SLAIGLLPAG GCAFFPVSGP SSASINAQSS PTSPYGLVPL TPETIDVIAA 
FEPKGLAGTF TDRRPSSNIK FGVGDIVSVT VFEAAAGGLY IPLEAGVRPG NYVALPDQVV
DNDGNITVPY AGAIRAAGRT NVQIQNDIIA RIKNRAIEPQ VVVALSQQRT SLISIIGEVN
TPLRFAMPAA GAGDRILDAI TRAGGIKGQG YETWVMLERD HRRATVPFEN LVMNASNNIF
VQPGDRIYVY REQQKFLAFG ATGNQGEFPF DAWRINLAEA VAKAAGLVDQ QADATSIYLY
RREPREVARR LGIDVNNIHD ELVPVIFTVN LRDPGGYFLA TRLQVRNQDI LFVANAQSYE
IDKFLSFVNH VAVTAHSIES PIAGASITRA DVAGHAVVAP