Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1033 |
Symbol | |
ID | 6198683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1183796 |
End bp | 1184998 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641705025 |
Product | polysaccharide export protein |
Protein accession | YP_001832165 |
Protein GI | 182678019 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCGT TTCGATGGGT TGCTTTGACC AGCCTAGCAA TTGGCCTCCT TCCTGCCGGA GGCTGTGCCT TTTTCCCGGT GAGCGGACCT TCCTCCGCTA GCATCAACGC GCAATCCTCC CCAACAAGCC CTTACGGGCT CGTCCCCCTG ACACCCGAAA CGATCGATGT GATCGCCGCC TTTGAACCCA AAGGGTTGGC CGGCACGTTC ACGGACAGGC GGCCCTCTTC GAACATCAAA TTCGGCGTCG GCGATATCGT CAGTGTCACT GTTTTCGAAG CGGCAGCAGG GGGCCTCTAC ATTCCGCTCG AGGCCGGTGT AAGGCCGGGT AATTACGTCG CCTTGCCAGA CCAAGTCGTC GATAATGATG GCAACATCAC TGTCCCCTAC GCCGGTGCTA TCCGCGCCGC AGGCCGCACC AATGTGCAAA TTCAGAACGA TATTATAGCC CGCATCAAGA ATCGGGCGAT CGAGCCGCAG GTCGTCGTCG CGCTGTCACA GCAGCGTACC TCTTTGATCA GCATCATTGG CGAGGTTAAT ACGCCTTTGC GCTTTGCCAT GCCCGCCGCG GGTGCTGGCG ATCGCATTCT CGATGCAATC ACGCGCGCTG GCGGCATCAA GGGCCAGGGT TACGAGACCT GGGTCATGCT CGAACGCGAC CATCGCCGCG CGACAGTGCC GTTCGAAAAT CTCGTGATGA ATGCGTCGAA CAATATTTTC GTGCAGCCCG GCGATCGCAT CTATGTCTAT CGCGAGCAGC AAAAATTCCT CGCTTTTGGC GCGACTGGAA ACCAAGGCGA GTTCCCGTTC GATGCCTGGC GCATCAATCT AGCGGAAGCC GTAGCCAAGG CGGCGGGTCT CGTCGATCAG CAGGCCGACG CGACCTCCAT CTATCTCTAT CGGCGTGAAC CGCGCGAAGT GGCGCGGCGG CTCGGCATTG ACGTCAACAA TATTCACGAC GAGCTCGTGC CTGTCATCTT TACAGTCAAT CTTCGTGATC CGGGTGGCTA TTTCCTCGCG ACACGATTGC AAGTGCGCAA TCAGGACATT CTCTTCGTCG CCAACGCCCA ATCCTATGAG ATTGATAAGT TCCTCTCCTT CGTCAATCAC GTTGCCGTTA CCGCTCATTC CATCGAGAGT CCCATCGCCG GAGCTTCCAT TACTCGGGCC GATGTCGCCG GTCACGCGGT TGTTGCACCG TAA
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Protein sequence | MSAFRWVALT SLAIGLLPAG GCAFFPVSGP SSASINAQSS PTSPYGLVPL TPETIDVIAA FEPKGLAGTF TDRRPSSNIK FGVGDIVSVT VFEAAAGGLY IPLEAGVRPG NYVALPDQVV DNDGNITVPY AGAIRAAGRT NVQIQNDIIA RIKNRAIEPQ VVVALSQQRT SLISIIGEVN TPLRFAMPAA GAGDRILDAI TRAGGIKGQG YETWVMLERD HRRATVPFEN LVMNASNNIF VQPGDRIYVY REQQKFLAFG ATGNQGEFPF DAWRINLAEA VAKAAGLVDQ QADATSIYLY RREPREVARR LGIDVNNIHD ELVPVIFTVN LRDPGGYFLA TRLQVRNQDI LFVANAQSYE IDKFLSFVNH VAVTAHSIES PIAGASITRA DVAGHAVVAP
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