Gene Bind_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0858 
Symbol 
ID6200466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp978394 
End bp979338 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content63% 
IMG OID641704856 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_001831997 
Protein GI182677851 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.283131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTCGT TCCATGGCTC GAACCCGTTC CGTTCGGGCC ATGCCCGCCC TTGGATCCTG 
CCTTTGTCCT CTCCCGCCGT CCTGGTCGAG CGCGCGCCCG CGAAGATCAA TCTCACCTTG
CATGTGCTCG GCCGCAGTGA TGATGGCTGG CATCAGCTCG AAAGCCTTGT CGCTTTTTCC
TGTGGCGGGG ATCAGCTTTC CCTGACGCCT GGCGAGCCGC TTGGCCTGAC GCTTGAAGGA
CCGACGGCTC CCTTGGCCGG CGACAATGAT CAGAATCTGG TTCTCAAGGC GGCTCGCAAT
CTCGGCCAGC AGATCGAAAA TCTGAAATTC GGCGCCTTTC ATCTCGTCAA ACGCCTCCCG
GTTGCGGCGG GCATTGGTGG CGGTTCGTCG GATGCGGCGG CAGCCCTTCG CCTTTTGGCG
CGGACCAATG GGATCCCCCT CGATGATCCG CGCCTGATGG CCGCAGCGCG CGCGACTGGC
GCCGATGTCC CCGTGTGTCT CGAACGGCGG GCACGCATGA TGCGCGGTGT CGGCGAGCAA
CTTGGCGAGC CGCTTCCTTT GCCTCCGCTC GTCGGGTTGA TTGTCAATCC GGGGCAGGCG
CTCGAAACCA AGGCCGTGTT TTCCCGCATG AATCTCACGC CTGGATCGCA GACCCATTAT
GGCCCGCATC CGGCTTTTTC TCCGAACCTT GACAGCTCTG GCTTCCTCGC CCTTCTGCGC
AAGGGCCGTA ACGATATGGA AGACGCGGCC TCGGTCCTGG CCCCGGTCAT TGGCGATGTG
CTGGCCATTC TCTCGGCGGC GCGTGGTTGC CAGCTCGCGC GCATGTCCGG GTCCGGCGCG
ACCTGTTTTG CGCTTTTTTC CGATTGTCGC GCCGCCGCCA AGGCCAAGAA AGTGATTTTG
CAAGCGCATC CCAACTGGTG GGTCAAGAGC TGCGCCTTTC GATAA
 
Protein sequence
MFSFHGSNPF RSGHARPWIL PLSSPAVLVE RAPAKINLTL HVLGRSDDGW HQLESLVAFS 
CGGDQLSLTP GEPLGLTLEG PTAPLAGDND QNLVLKAARN LGQQIENLKF GAFHLVKRLP
VAAGIGGGSS DAAAALRLLA RTNGIPLDDP RLMAAARATG ADVPVCLERR ARMMRGVGEQ
LGEPLPLPPL VGLIVNPGQA LETKAVFSRM NLTPGSQTHY GPHPAFSPNL DSSGFLALLR
KGRNDMEDAA SVLAPVIGDV LAILSAARGC QLARMSGSGA TCFALFSDCR AAAKAKKVIL
QAHPNWWVKS CAFR