| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0858 |
|---|
| Symbol | |
|---|
| ID | 6200466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 978394 |
|---|
| End bp | 979338 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641704856 |
|---|
| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_001831997 |
|---|
| Protein GI | 182677851 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.283131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTTCGT TCCATGGCTC GAACCCGTTC CGTTCGGGCC ATGCCCGCCC TTGGATCCTG
CCTTTGTCCT CTCCCGCCGT CCTGGTCGAG CGCGCGCCCG CGAAGATCAA TCTCACCTTG
CATGTGCTCG GCCGCAGTGA TGATGGCTGG CATCAGCTCG AAAGCCTTGT CGCTTTTTCC
TGTGGCGGGG ATCAGCTTTC CCTGACGCCT GGCGAGCCGC TTGGCCTGAC GCTTGAAGGA
CCGACGGCTC CCTTGGCCGG CGACAATGAT CAGAATCTGG TTCTCAAGGC GGCTCGCAAT
CTCGGCCAGC AGATCGAAAA TCTGAAATTC GGCGCCTTTC ATCTCGTCAA ACGCCTCCCG
GTTGCGGCGG GCATTGGTGG CGGTTCGTCG GATGCGGCGG CAGCCCTTCG CCTTTTGGCG
CGGACCAATG GGATCCCCCT CGATGATCCG CGCCTGATGG CCGCAGCGCG CGCGACTGGC
GCCGATGTCC CCGTGTGTCT CGAACGGCGG GCACGCATGA TGCGCGGTGT CGGCGAGCAA
CTTGGCGAGC CGCTTCCTTT GCCTCCGCTC GTCGGGTTGA TTGTCAATCC GGGGCAGGCG
CTCGAAACCA AGGCCGTGTT TTCCCGCATG AATCTCACGC CTGGATCGCA GACCCATTAT
GGCCCGCATC CGGCTTTTTC TCCGAACCTT GACAGCTCTG GCTTCCTCGC CCTTCTGCGC
AAGGGCCGTA ACGATATGGA AGACGCGGCC TCGGTCCTGG CCCCGGTCAT TGGCGATGTG
CTGGCCATTC TCTCGGCGGC GCGTGGTTGC CAGCTCGCGC GCATGTCCGG GTCCGGCGCG
ACCTGTTTTG CGCTTTTTTC CGATTGTCGC GCCGCCGCCA AGGCCAAGAA AGTGATTTTG
CAAGCGCATC CCAACTGGTG GGTCAAGAGC TGCGCCTTTC GATAA
|
|---|
| Protein sequence | MFSFHGSNPF RSGHARPWIL PLSSPAVLVE RAPAKINLTL HVLGRSDDGW HQLESLVAFS
CGGDQLSLTP GEPLGLTLEG PTAPLAGDND QNLVLKAARN LGQQIENLKF GAFHLVKRLP
VAAGIGGGSS DAAAALRLLA RTNGIPLDDP RLMAAARATG ADVPVCLERR ARMMRGVGEQ
LGEPLPLPPL VGLIVNPGQA LETKAVFSRM NLTPGSQTHY GPHPAFSPNL DSSGFLALLR
KGRNDMEDAA SVLAPVIGDV LAILSAARGC QLARMSGSGA TCFALFSDCR AAAKAKKVIL
QAHPNWWVKS CAFR
|
|---|
| |