| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0719 |
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| Symbol | |
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| ID | 6200734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 806138 |
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| End bp | 808990 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641704716 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001831858 |
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| Protein GI | 182677712 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.187064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCTAT GGGCCCTTGG CCTGTCGCTT CCCGCCGCCG CCGTCGAGGC GGTGCGTGTC
CCGCTCGACG CGCAAGCGAT TGATCTGACC CATTCGGTCG TGAGCTATCG CTCGGAAGGG
GATCGCCTGC AGGTTTCGAC CGCGCCGGGT TCCGATGGGA TCGTGCGCCG TATCGAAGTG
AGCGCCCGCG AGGCCGGCAC GCAACCGTCC TGGATCGTCT TCGCTCTGAC CAATGACACG
GATGAGCAAA TCGAAAGACT GATCGTCGCA CCGCATTTCC GGCTGGTCGG CTCGGGCGTG
ATCTGGCCCG ATCTCGGAGC GACCCGGATT TCCGCGATCA CAGCCAGCCA GGGTTTCGCG
CCCGAGCGCG AGGACAATAA TGACGCCGAT GTCTTCCGGC TCACGCTCGA TCCCGGCACG
ACCATCACTT ACGTCGCGGA ATTGCGCACG CCCAACCTGC CGCAAATCTA CCTGTGGGAG
CCGGACGCTT ATAAGGATAA GATCACCAGC CTGACGCTCT ACAAGGGCAT CGTCATCGGC
ATTGCCGGCC TTTTGGCCTT ATTCCTGACC ATCGTCTTTG TCGTGCGTGG CGCGGTGATC
TTTCCCGCCG CCGCCGCTCT GGCCTGGACG GTGCTCGCCT ATGTCTGCAT CGATTTCGGT
TTCTGGAGCA AACTCTTCGA TCTCGAAGGG CCGGCCGAAC GGATCTGGCG TGCCTGTACC
GAAACCGTTC TCGCCGCGAC GCTGCTCGTC TTTCTCTTCG CTTATCTCAA TCTCAACCGC
TGGCATGTGC GCGCCTCGCA TATTACGGCC ATCTGGCTCG TCTTCCTGAC CGCACTCGTC
GGTCTTGCGA TCTATGACGC GCCGGTCGCG GCCGGCGTCG CGCGTATTTC GCTCGCGACC
ATTGCCGGCA TCGGCTTCAT TCTGGTGATC TATCTCGCGG CGCATGGCTA TGACCGGGCC
GTGATGCTGA TCCCTACCTG GTTCCTGCTG CTCGCATGGA TCGTTGGCGC GGCCTTTACG
GTCACCGGCA AGCTCACCAA TGACCTCGTC TCGCCCGCGC TCATCGGCGG CTTGGTGCTG
ATCGTCATGC TGATCGGCTT CACGATCATG CAAAATGCTT TCACTGGCCT CGCCCTCGGT
CAGCACGCCG TTAGCGATGT CGAACGCAAA GCATTGGCGC TCTCCGGCTG CGGCGACAAT
ATTTTCGATT GGAATGTTCC AGCCGATCAG GTCTATGTCG CTCCCGAAGT CGAAGCCCAT
CTCGGCCTTG ATCGCGGCGC GCTGGAAGGA CCGGCTTCCG CCTGGCTCGA CCTTTTACAT
CCGCTCGATC GCGACCGTTA TCAAGCCTCG CTCGACACCA TGCTGGAACA AAGGCGCGGC
CGTATTCATC AGGAATTCCG GCTGCGCGCG GTCGATGGCC AATATTTCTG GTTTCTGTTC
AAGGCCCGGC CCGTCGTCGC CCAGGATGGC GAAGTGATCC GCATCATCGG CACCCTGGCC
GATGTCACGG AAAACCGGAT CTCACAGGAA CGCCTGCTGC ACGATGCCGT TCATGACAAT
CTGACCGGTC TGCCCAATCA GGCCCTGTTC TTCGACCGGA TCGACGCGGC TTTGGTCTTT
GCGGCCAATG ATCCGGAGAT CCAACCCTCG ATCATCAGTC TCGATATCGA TCGCTTCAAG
ACAGTCAATG AGACGATCGG TCTTTCCGCT GGCGATTCCA TCCTCCTGAC CATTGCCCGC
AGGCTCGGCC GCATTCTCAA ACCCCAGGAC GCGCTGGCCC GCATCAGCGG CGATCAATTC
GCCATTCTCA TCCTGTCCGA ACATGATCCC CAGGCCATCA CGGCCTTCGC CAATGTCGTT
CAGCGCGTCG TCTCGACGCC GGTGAGTTTC GCTGAACGGG AAATTCCCCT CACCGCCTCG
ATCGGCGTCG CTTTGTTCGA TCCGTATCAG CCGCAAAGCC GCGAGGATCT CGTCAAGAAC
GCCGAAATCG CCATGCATCA TGCCAAGCGG GGCGGTGGCA ACAGGATCGA ACTGTTTCGC
GCTTCGCTGC GGGGCTTGCG GTCCGATCGC ATCGCCCTTG AGGCGGATCT GCGCCGCTGC
CTCGAACGCG GTGAGATGAA AGTTTATTTC CAGCCGATCA TCCGGCTCGA GGATCGCACT
GTCGCCGGCT TCGAGACCGT TTTACGCTGG GATCATCCGC GTCTCGGCCG GCTGACCGCC
GCCGAATTTC TTCCTCTCGC GGAGGAAACC GGTTTTATCG TGGATCTCGG TATTTTCGCC
CTGGAACGCA CTGGGCGCGA GCTTGCCACC TGGCAGAACG CGCTCAATGT CGACCCACCC
ATTTTTGCGA GCGTCAATAT TTCATCCCGG CAATTGCTGC GTCATGATCT TCTGCATGAC
ATCAAGACGT TGCTTGCCCG CTTTCATGTC GCGCCCGGCA CGCTGAAGCT TGAAGTCAGC
GAGAGCCTGA TCATGGAAAA TCCGGAATAT GCGGCGCAGA TGCTGGGTCG CATCCGCGAA
CTCGGCGCCG GCCTGTCACT CGACGATTTC GGCACCGGCT ATTCCTCCCT TGCCTATCTG
CAGCGCTTTC CTTTCGACAC GATCAAGATC GATCGTTCCT TCGTCCATCA GAACGGCCAG
GGGCAAGGAT CGCGCTCCGT CATCCTGCGC GCCATGGTGA CTTTGGCGCA TGACCTCGGC
ATGGATGTGG TGGCAGAGGG TGCGGAATCG GAATCCGATG CGATCGAACT GTATCAGCTC
GGCTGTGAAT ATGCGCAGGG CCACGCCTTC GGCCATCCGA TCAGCATGGC TGACGCCCGC
AAGCTGGTCG GTGCCACGAC GATAGCAGCT TAA
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| Protein sequence | MVLWALGLSL PAAAVEAVRV PLDAQAIDLT HSVVSYRSEG DRLQVSTAPG SDGIVRRIEV
SAREAGTQPS WIVFALTNDT DEQIERLIVA PHFRLVGSGV IWPDLGATRI SAITASQGFA
PEREDNNDAD VFRLTLDPGT TITYVAELRT PNLPQIYLWE PDAYKDKITS LTLYKGIVIG
IAGLLALFLT IVFVVRGAVI FPAAAALAWT VLAYVCIDFG FWSKLFDLEG PAERIWRACT
ETVLAATLLV FLFAYLNLNR WHVRASHITA IWLVFLTALV GLAIYDAPVA AGVARISLAT
IAGIGFILVI YLAAHGYDRA VMLIPTWFLL LAWIVGAAFT VTGKLTNDLV SPALIGGLVL
IVMLIGFTIM QNAFTGLALG QHAVSDVERK ALALSGCGDN IFDWNVPADQ VYVAPEVEAH
LGLDRGALEG PASAWLDLLH PLDRDRYQAS LDTMLEQRRG RIHQEFRLRA VDGQYFWFLF
KARPVVAQDG EVIRIIGTLA DVTENRISQE RLLHDAVHDN LTGLPNQALF FDRIDAALVF
AANDPEIQPS IISLDIDRFK TVNETIGLSA GDSILLTIAR RLGRILKPQD ALARISGDQF
AILILSEHDP QAITAFANVV QRVVSTPVSF AEREIPLTAS IGVALFDPYQ PQSREDLVKN
AEIAMHHAKR GGGNRIELFR ASLRGLRSDR IALEADLRRC LERGEMKVYF QPIIRLEDRT
VAGFETVLRW DHPRLGRLTA AEFLPLAEET GFIVDLGIFA LERTGRELAT WQNALNVDPP
IFASVNISSR QLLRHDLLHD IKTLLARFHV APGTLKLEVS ESLIMENPEY AAQMLGRIRE
LGAGLSLDDF GTGYSSLAYL QRFPFDTIKI DRSFVHQNGQ GQGSRSVILR AMVTLAHDLG
MDVVAEGAES ESDAIELYQL GCEYAQGHAF GHPISMADAR KLVGATTIAA
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