| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0521 |
|---|
| Symbol | |
|---|
| ID | 6199796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 576054 |
|---|
| End bp | 576551 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641704512 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001831662 |
|---|
| Protein GI | 182677516 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTGC GCCCAGTCAT ACGATTTCCC GACCCACGCC TCAGCATGGC GGCTCAAAAG
GTCGAACATT TCGATGAGAC ACTCCGAACC CTCGCGGATG ATCTGGTCGA GAGCCTGCAC
GCCGCCCACG GCATCGGCAT TACCGCGCCC CATATCGGTG TTCCGGCGCG CCTCGTTGCC
CTCGAACTCA CGCCCAACCA AACACGTCTT TACGTAAATC CGGAAATCAT TTGGTCCTCG
GATACAAAGA TCCGGCACCA GGAAGGCAGC GTCTCCATGC CCGGCGTGAC CGAAATCGTG
GAACGCTGCG CTGAAATCCA TGTGCGCTAT CAAGATCTCG ACGGGTCTGT CCATATCGAG
AAGGCTGATG GTTTCCTCGC GATCTGTCAT CAGCATGAAA TCGACCAGCT CGATGGTCTT
TTCTGGATAC AAAGACTCTC GCGCCTCAAA CGCGAACGTG TCATCAAACG CTATGAAAAA
TTAGCGTCTG ACCGATAA
|
|---|
| Protein sequence | MAVRPVIRFP DPRLSMAAQK VEHFDETLRT LADDLVESLH AAHGIGITAP HIGVPARLVA
LELTPNQTRL YVNPEIIWSS DTKIRHQEGS VSMPGVTEIV ERCAEIHVRY QDLDGSVHIE
KADGFLAICH QHEIDQLDGL FWIQRLSRLK RERVIKRYEK LASDR
|
|---|
| |