Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0176 |
Symbol | |
ID | 6199555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 209216 |
End bp | 210619 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641704171 |
Product | major facilitator transporter |
Protein accession | YP_001831322 |
Protein GI | 182677176 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.877079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC AGAGGGCGGA CTCCGATGTA GAGAACGGGG CCGGGCTGAA ATTCCTGGTT TTTGCATCAA GCCTTGGCAC CATGATCGAA TGGTATGATT TCTTTCTCTA CGGCAGCCTG GCGGTTTTCT TTTCTGAACT CTTCTATCCC AAGGACAATC CGGTTGCGGC TTTGCTCATC AGCGTTGCCA CTTTTGCGAC GGGCTTTGCC GTGCGTCCTC TTGGTGCCGT ATTGTTCGGC CATCTCGGCG ACAGGATCGG TCGCAAGACG ACTTTCCTGA TCACCTTGCT CTTGATGGGT GGTGCCACGG CCCTGATCGG CATTTTGCCG ACCTATGCCA GCGTCGGCCT TTTGGCGCCT GTCCTGCTCG TCGTGCTGCG TCTCATCCAA GGTCTGGCGC TCGGTGGCGA ATATGGTGGC GCGGCAACTT ATGTGGCCGA ACATGCGCCA GATGGCAGAC GGGGTGGCTG GACGAGCGCG ATCCAGACCA TGGCCTCGAT GGGGTTCTTC GTATCTCTCG CGGTGGTCCT GTCCTGCCGT TTTCTTTTGG GTGATGCCAT CTTTGCATCC TGGGGCTGGC GCATTCCCTT CCTGCTTTCG GCCGTGCTGG TGATGCTCTC TCTTGGGGCG CGTTTACGGC TTGCCGAATC GCCGATCTTT CTTCAGCTCA AGGCCGAGGA TCGTGTGTCG AAATCACCCG TGCGCGAAAG TTTCGCCGAT CCGCGTAATC GCCGCCTGAT GCTCGCCGTT CTGTTCGGAG TCGCGAGCGG TCAGGCCGTG ACGTTCTATA CGGCAAATTT TTACGCGCTT TATTTCCTCC AGAGTATTTT GAAGGTGGAT TTCCTGACCT CGAATCTTGT GATGGTTCTG GGTGTCTTGA TCGGCATGCC TCTCTTTGTC CTGTTTGGCA TCTGGTCCGA TAAAATCGGC CGCAAGCCGC TCATCATCGC CGGTATGGCG GCGGCGGTCG TGCTGCTAGT GCCGATCTTC ATGGTCATGC AGTCGGCGGT CGGTCCGCAG GGTATCAATA TCTGGTTGCT GGCAGCCTGT GTTTTCGTTC TCGTCGCGAT TGCGGCGGCG GTCTATGGAC CTTACGCGGC CTATCTCGTC GAGGTCTTTC CGCCGCAGAT TCGTTATACG TCCTTGTCGA TCCCCTATCA TATCGGCAAT GGCATTTTCG GCGGCTTTCT GCCGCTGATT GGCTTGTCAC TGGTCGCGGC CACAGGCAAT CCGCTCGCCG GGCTCATCTA TCCGATTGCG GTTTGCGTGA TCAATGTCAT CATTGGCAGC CTCTATCTGC CGGAGACATT GCATACACCG ATTGATGGCC GGACCTCCGT CGAGGATCTG GCGGATGAAA GCCTGCCTTT CGCGGCCGCG CTGCCGCCGA AATCCGCCGC CTAA
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Protein sequence | MTTQRADSDV ENGAGLKFLV FASSLGTMIE WYDFFLYGSL AVFFSELFYP KDNPVAALLI SVATFATGFA VRPLGAVLFG HLGDRIGRKT TFLITLLLMG GATALIGILP TYASVGLLAP VLLVVLRLIQ GLALGGEYGG AATYVAEHAP DGRRGGWTSA IQTMASMGFF VSLAVVLSCR FLLGDAIFAS WGWRIPFLLS AVLVMLSLGA RLRLAESPIF LQLKAEDRVS KSPVRESFAD PRNRRLMLAV LFGVASGQAV TFYTANFYAL YFLQSILKVD FLTSNLVMVL GVLIGMPLFV LFGIWSDKIG RKPLIIAGMA AAVVLLVPIF MVMQSAVGPQ GINIWLLAAC VFVLVAIAAA VYGPYAAYLV EVFPPQIRYT SLSIPYHIGN GIFGGFLPLI GLSLVAATGN PLAGLIYPIA VCVINVIIGS LYLPETLHTP IDGRTSVEDL ADESLPFAAA LPPKSAA
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