| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0173 |
|---|
| Symbol | |
|---|
| ID | 6201759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 205282 |
|---|
| End bp | 206178 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641704168 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001831319 |
|---|
| Protein GI | 182677173 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0103543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAG GGTTCGACTG GAACGACCTG CGCTTTTTCC TGGCCGTAGC GCGAGCGGGC
ACTGTCTCGC TCGCCGCCCG GCGCCTCGGC GTAGATCACG CCACGGTCAT CCGGCGGATC
GATGGACTGG AACATGCGCT GGGCGCCAAA ATCTTCGAAC GCAACCCGCG CGGCTATAAT
GTGACGCAGA AAGGCGAGAA ACTGCTCGCC TCGGCTCAGA TGATTGAAAG CGAAGCCCAA
AAGGCCGAGC AAGAACTGGC CGGCAGCCAT CAGACGGTTT CCGGCCTCGT CCGGATCAGT
TCGCTCGAAG GGTTCGGGAA TTTCTTCCTG GCGAGCCGCC TGCCGCGCTT CACGGCGAAC
CATCCCAATA TCACGCTCGA ATTGCTCAAT ATTCAGCAGA TCGTCGCGCT CTCGCGCCGC
GAGGCCGATC TCGCCATCAC CTTGCAACCG CCGGAAACCG GCCGTTTCGT GCGCGAGCGC
CTCACCGATT ACATGCTATT CGTTTATGGC TCGCGCGCCT ATCTCGACAA TGCGAAACCC
ATTCGAACGC GCGAGGATTT CATCGATCAT CCGTTCTCCG GCTATATTGA CGATCTCGTT
TTCACGCGCG GCCTCGATTA TCTGCATGAA GTCAAACCAG GCTTGCGTGC ACGCATACAG
AGTTCGAGCC TTCATGCACA AATGGAAGCG GCATGCGCCG GTTTCGGCCT TTGCATCCTG
CCAGCCTTCA TCGCCGCGCA CAGGCCAGAA CTCGTGCCCG TCCTACCGCA GGAGGTGGCT
CTCAAGCGCT CCTATTGGCT GGTCGCTGAT GCCGATGCGG CGATGAGTTC CCGCATCCGC
GCGGTGCGCC ACTTCATTTT CGCGGAGGTT GCCGAGGCGC AGGCCCTCTT CGTGTAG
|
|---|
| Protein sequence | MDRGFDWNDL RFFLAVARAG TVSLAARRLG VDHATVIRRI DGLEHALGAK IFERNPRGYN
VTQKGEKLLA SAQMIESEAQ KAEQELAGSH QTVSGLVRIS SLEGFGNFFL ASRLPRFTAN
HPNITLELLN IQQIVALSRR EADLAITLQP PETGRFVRER LTDYMLFVYG SRAYLDNAKP
IRTREDFIDH PFSGYIDDLV FTRGLDYLHE VKPGLRARIQ SSSLHAQMEA ACAGFGLCIL
PAFIAAHRPE LVPVLPQEVA LKRSYWLVAD ADAAMSSRIR AVRHFIFAEV AEAQALFV
|
|---|
| |