Gene Bfae_29460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_29460 
Symbol 
ID8401490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3324052 
End bp3325233 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content67% 
IMG OID644998978 
Productmultiple monosaccharide ABC transporter membrane protein 
Protein accessionYP_003156297 
Protein GI257070042 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4214] ABC-type xylose transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGAA CTTCTGACAT CAAGGAGCTG CTCACGCGCA ACATGCGCTC GAGCGGCATC 
TACATCGCAT TCGTCTTCAT CATCGTGCTG TTCTCGATCC TCACCAAGGG ACAGCTGCTC
AGCCCGGGCA ACCTCACCAA CCTGGTGCTG CAGTACTCCT ACATCCTGAT CCTCGCGATC
GGCATGGTGC TGATCATCGT CGCCGGGCAC ATCGACCTGT CGGTGGGCTC GGTGGTCGCG
CTGACCGGCG CGGTCGCCGC CGTGGTGGTG ATCGGCAACG GCCTGCCCTG GTGGGTGGGC
GTGGTCGCCG CGCTCGCCAC CGGCGTGCTG GTGGGGCTGT GGCAGGGCTT CTGGGTGGCC
TATGTGGGCA TCCCGGCGTT CATCGTCACC CTGGCCGGCA TGCTCATCTT CCGCGGCCTG
ACCATGCAGG TGCTCGGCAA CGTCTCCCTC TCGCCGTTCC CGAAGGAGTA CCAGTACATC
TCCGGCGGCT TCCTCAACGG GCTGCTGGGC GGGAACGGCT ACGACGCCTT CACGCTCATC
CTCGGCGCCG CGCTGATCGC GGTGTTCGTG ATCCAGCAGT ACCGCGGCCG CCTCGCGAAG
CTGAAGTACA AGCAGCAGGT CGAGGCGTTC TGGCTGTTCT GGGTGAAGAA CCTCGCCGTG
GCCCTCGTGG TCATGGCCTT CGCCTGGCAG CTCGCGCACT CGCGCGGCCT GCCCGTGGTG
CTGATCCTGC TGGCCGCCCT CGTGCTCATC TACGGCTTCG TCAGCCAGCG CACGATCTTC
GGCCGGCACA TCTACGCGAT GGGCGGCAAC CTCCAGGCCG CACGGCTCTC CGGTGTGAAG
ACCCGCCGCG TGAACATGTG GCTGTTCGTC AACATGGGCC TGCTCTCGGC CATCGCCGGC
ATCGTCTACT CGGCGCGCTC CAACAGCGCC CAGCCCGGCG CCGGCAACAT GTTCGAGCTC
GACGCGATCG CCGCCGCCTT CATCGGCGGC GCCGCGGTGA CCGGCGGCGT GGGCAAGGTC
CACGGCGCGA TCATCGGCGG TCTGATCATG GCGGTCATGT CCAACGGCAT GTCGATCATG
GGCATCGACC AGTCCACCCA GTCGGTGGTG CGCGGCGTGG TCCTGCTGAT CGCCGTCGCC
TTCGACGTCT GGAACAAGAA GCGCTCCGGC ACCGGCGCCT GA
 
Protein sequence
MAGTSDIKEL LTRNMRSSGI YIAFVFIIVL FSILTKGQLL SPGNLTNLVL QYSYILILAI 
GMVLIIVAGH IDLSVGSVVA LTGAVAAVVV IGNGLPWWVG VVAALATGVL VGLWQGFWVA
YVGIPAFIVT LAGMLIFRGL TMQVLGNVSL SPFPKEYQYI SGGFLNGLLG GNGYDAFTLI
LGAALIAVFV IQQYRGRLAK LKYKQQVEAF WLFWVKNLAV ALVVMAFAWQ LAHSRGLPVV
LILLAALVLI YGFVSQRTIF GRHIYAMGGN LQAARLSGVK TRRVNMWLFV NMGLLSAIAG
IVYSARSNSA QPGAGNMFEL DAIAAAFIGG AAVTGGVGKV HGAIIGGLIM AVMSNGMSIM
GIDQSTQSVV RGVVLLIAVA FDVWNKKRSG TGA