Gene Bfae_29090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_29090 
Symbol 
ID8401453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3279182 
End bp3280345 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID644998941 
Productpredicted dehydrogenase 
Protein accessionYP_003156260 
Protein GI257070005 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.252853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACAC GCAGGATCGG GATCATCGTC AACGGCGCCA CGGGGCGCAT GGGCTACCGC 
CAGCACCTGG TGCGGTCCCT GCTCGCGATC CAGGAGCAGG GAGGGGTCGA GATCGCCGGC
GGCGACCGGC TGCTGCCGGA CCTGCTGCTG GTGGGCCGCA ACGAGGAGAA GCTGCGGGGC
GTGGCGGAGA AGCACGGCCT GACGGCGTGG ACCACCGACG TCGACGAGGC GCTCGCGAAC
CCGGACTACG AGGTCTACTT CGACGCCCTG GTCACCAACC TGCGCGTCGC GAACCTCAAG
AAGGCGATCG CCGCCGGCAA GGCGATCTAC ACCGAGAAGC CCACCGCGGA GACCTTCGAG
GACGCCCTCG AGCTCGCGAA GCTCGCGAAG GAGGCGGGCG TGGTCAACGG GGTGGTCCAC
GACAAGCTGT ACCTGCCCGG CCTGCTCAAG CTGCGCCGCC TCATCGACTC CGGCTTCTTC
GGCGAGATCC TCTCCGTGCG CGGCGAGTTC GGCTACTGGG TCTACGAGGG GGACTGGCAG
AGCGCCCAGC GGCCCTCCTG GAACTACCGC AGCGAGGACG GCGGCGGCAT CGTCGCGGAC
ATGTTCCCGC ACTGGAACTA CGTCATCGAG GAGCTGTTCG GCCGCATCGA GGACGTCTAC
GCCCAGACCG CCACCCACAT CGGGCGGCGC TGGGACGAGC AGGGCGAGCA GTACACCGCC
ACCGCCGACG ACGCCGCCTA CGGCGTGTTC CGCCTCGAGG GCGGCACCGT GGTGCAGATG
AACTCCAGCT GGGACGTGCG CGTGCACCGC GACGAGCTGG TCGAGTTCCA GGTCGACGGC
ACCAGGGGCA GCGCCGTCGT CGGCCTGCAC GGGGCCCGCG TCCAGCCGCG CGAGGCCACC
CCGAAGCCGG TGTGGAACCC CGACGTCAAG GACCCGCACG ACTACCGCGG CGACTGGATC
GAGGTGCCGG ACAACGCCGG ACCGGACGGC TTCGACAACG GCTTCAAGGT GCAGTGGGAG
GACTTCCTCG CGCACTATGC AGAGGGCCGC GAGTACCCCT TCGACTTCCT CTCCGGCGCG
CGCGGCGTGC GCCTGGCCGA AGCGGGCCTG ACCAGCTCCG CCGAGGGCCG CCGCATCAGC
CTCGACCCGC TCACGGAGGT GTGA
 
Protein sequence
MATRRIGIIV NGATGRMGYR QHLVRSLLAI QEQGGVEIAG GDRLLPDLLL VGRNEEKLRG 
VAEKHGLTAW TTDVDEALAN PDYEVYFDAL VTNLRVANLK KAIAAGKAIY TEKPTAETFE
DALELAKLAK EAGVVNGVVH DKLYLPGLLK LRRLIDSGFF GEILSVRGEF GYWVYEGDWQ
SAQRPSWNYR SEDGGGIVAD MFPHWNYVIE ELFGRIEDVY AQTATHIGRR WDEQGEQYTA
TADDAAYGVF RLEGGTVVQM NSSWDVRVHR DELVEFQVDG TRGSAVVGLH GARVQPREAT
PKPVWNPDVK DPHDYRGDWI EVPDNAGPDG FDNGFKVQWE DFLAHYAEGR EYPFDFLSGA
RGVRLAEAGL TSSAEGRRIS LDPLTEV