| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_27920 |
|---|
| Symbol | |
|---|
| ID | 8401336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3133998 |
|---|
| End bp | 3135251 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644998828 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_003156148 |
|---|
| Protein GI | 257069893 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.694602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCCGA ATCTGCCCCT CGATACCGTC GCCGTGATCG GCCTGGGATA CATCGGCCTT
CCCACAGCCG CAGTGCTCGC CCAGGCGGGC AAGACGGTGA TCGGTGTGGA CGTGGCGCAG
GCGACCGTCG AGGCGATCAA CGCCGGCACC GTGCCCTTCG TCGAAGAGGG GCTCGCGACG
GTCGTCGCCG GCACCGTCGC ACAGGGGAAG CTCTCGGCGC AGACGGAGAC TCCCCAGGCA
GATGCCTACA TCGTCTCCGT CCCCACCCCG TTCAAGGGCG ACCACGACGC CGACCTCTCG
TACATCGAAG CCGCCGCGAA GGGCATCGCC CCGCAGCTCT CCGGAGGCGA GCTGGTGGTG
CTCGAATCCA CCGCGCCCCC CGGCGCCACC GAGTTCATGG CCGAGGTGAT CCTCGGGCTG
CGCCCCGAGC TCACCATGGA GCCGAACCTG CCGAACTCGC TGTACTTCTC GCACGCCCCG
GAGCGGGTGC TGCCCGGCCG CATCATGGTC GAGATGCTCG AGAACGATCG CATCATCGGC
GGTCTGAGCA CGGAGGCCGC CGAGCTGAAC CGTGATCTGT ACGCGAGCTT CTGCACCGGC
GAGCTGCTGC TCACCGACGC CCGCACCGCG GAGATGGCCA AGCTCACCGA GAACGCGTTC
CGCGACGTCA ACATCGCCTT CGCCAACGAG CTGTCGCTCA TCGCCGAGCG GCAGGGCATC
GACGTGTGGG AGCTGATCGA ACTCGCCAAC CACCACCCGC GCGTGAACAT CCTCCAACCC
GGGCCCGGCG TGGGCGGCCA CTGCATCGCC GTGGACCCCT GGTTCATCGT CTCCGCGGAT
CGCGAGAACG CGAAGCTCAT CGCCGCGGCC CGCGGCGTCA ACGACTCCAA GCCGGAAGCC
GTGCTGGCCA AGGTGCTGGA GCGGGCGGAG CGGCTGAAGC ATCCGACGAT CGCGGCGCTC
GGTCTCGCCT TCAAGGCGAA CATCGACGAC CTGCGCGAGT CCCCCAGCAA GGACATCGCC
GTCGCGCTCA CGGAACGGCT GGACGAGGGC ACGGTGCTCG TCGTGGAGCC CAACATCGAC
GCGCTCCCCC GCGAGTTCGA CGGCCGCGGC AACGTCGAGC TGGCCGCGCT CGAGGACGCC
GTCGAGCGTG CCGACATCGT GCTGCTGCTC GTGGACCACG ATCCGTTCCG GACCCTCGAC
CGCGAGACGC TCCAGGAGAA GGTCGTGATC GACACCAAGG GGCTGTGGCG GTGA
|
|---|
| Protein sequence | MSPNLPLDTV AVIGLGYIGL PTAAVLAQAG KTVIGVDVAQ ATVEAINAGT VPFVEEGLAT
VVAGTVAQGK LSAQTETPQA DAYIVSVPTP FKGDHDADLS YIEAAAKGIA PQLSGGELVV
LESTAPPGAT EFMAEVILGL RPELTMEPNL PNSLYFSHAP ERVLPGRIMV EMLENDRIIG
GLSTEAAELN RDLYASFCTG ELLLTDARTA EMAKLTENAF RDVNIAFANE LSLIAERQGI
DVWELIELAN HHPRVNILQP GPGVGGHCIA VDPWFIVSAD RENAKLIAAA RGVNDSKPEA
VLAKVLERAE RLKHPTIAAL GLAFKANIDD LRESPSKDIA VALTERLDEG TVLVVEPNID
ALPREFDGRG NVELAALEDA VERADIVLLL VDHDPFRTLD RETLQEKVVI DTKGLWR
|
|---|
| |