| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_20160 |
|---|
| Symbol | |
|---|
| ID | 8400562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 2253700 |
|---|
| End bp | 2255565 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644998077 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| Protein accession | YP_003155414 |
|---|
| Protein GI | 257069159 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.533008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCT CCACCCTCGT CCCGCGCGGC GGGAAGGTCC GTGCCGGCCT GCTCATCGTG
CTGGTGTTCG CGGCGCTGGC CGTGTTCGGG CCGATGATCG CCCGCTTCGA CCCGAGCCAG
ACCTCCTTCG AGATGCTCGA GCCGCCCTCG GCGCGGCACT GGCTGGGCAC CACCCAGACC
GGCCAGGACG TGTTCGCGCA GTTCATGACC GGTGCCCGCA CCTCCCTCCT GGTGGGGCTG
CTGGCCGGGG TCGTCTCCCA GGTGGTCTCC GTGGCCGTCG GCCTGCTCGG CGGGTACCTC
CGCGGCGTCG CCGACGATCT GCTGTACATC CTCACCGCGG TGTTCCTGGT GATCCCCGGC
ATGCCGATCC TCATCGTGCT CACCGGGTAC CTGCCCTCGC GCGGGCTGCT GTCGATCGCG
ATCGTCATCG CGATCACCTC CTGGGCCGGC TCCGCCCGCG TGATCCGCGC CCAGACCCTC
TCCCTGCGCA ACCGCGAGTT CGTCGAGGCG GCCCGCGCCA CCGGCGAGAG CCGGATCCGG
ATCATGTTCT TCGAGGTCCT GCCCAACATG CTCCCGCTGG TCGCCTCCGG CTTCCTGTTC
TCGGTGATCG GCGGCATCCT CGCCGAGGCC GGTCTGGCCT TCCTGGGGCT CGGCTCGCTG
ACCACCACCA GCTGGGGGTC GATGCTCTAC TTCGCGCAGA ACTCCCAGGC GCTGCTGGCC
GGCGCCTGGT GGTGGTACGT GCCGCCGGGC CTCGCGATCG CGGTGATCGG CGCGGGCCTC
GCCCTGATCA ACTTCGCGAT CGACGAGTAC TCCAACCCGC GCCTGCGCAC CGGAGCGGCG
GTGCGGAAGG GGGCGGCCGC CCGCGCCGCG GGCGGCGACG CCACCAGCAC GGACGCCCAG
GCCTCGGGGA TCGGCTCGAC GGGACCGCGC CGCCCGGGCG GCGCGACCGG CGCGACGGCG
GAGCACGTCG CCCTCACCGA CGACCGCGCT CCCGCCGGGA CGGAGCAGCG GGAGGATCCG
GAGCTCGCCC CGCGCCTCCG CCCCTCCCCG ATGCCGGGCT CGCCCATCAT CGAGGTCGAC
GCGCTGCACG TGGACTACCC GACCGGGTTC GGGACGGTCC ACGCCGTCGA GGACGTCTCG
CTGACGCTGC GCCGCGGCGA GATCCTCGGA CTGGCGGGCG AATCCGGGTC GGGCAAGTCC
ACCCTCACCA ACGCGATCAC CCGGCTGCTG CGACCCCCGG CCGAGATCAC CGACGGGTCG
ATCACCTACC GGGCGGAGGA CGGCACGGCC ACGGACCTGC TGCACCTCGA GGACCGGGAG
CTGAGGGCCC TGCGATGGAA CGAGATCGCC GTGGTGTTCC AGAGCGCCAT GAACGCGCTG
AACCCCGTCA CCTCGATCCA CGCCCAGTTC GACGACGTGA TCCGGGTGCA CCGACCCGGG
CTGCCCCCGG CGCGGCGCAC CGAGATCGCG AAGGAGCACC TGCGCCGGGT GGGGATCGAC
CCCTCGCGGA TCGACGCCTA CCCGCACGAG CTCTCCGGCG GCATGAAGCA GCGGGTCGCG
ATCGCGATCG CCCTCGTGCT CGAGCCCGAC GTGATCTTCA TGGACGAGCC GACCACCGCG
CTGGACCTGC TGGTGCAGCG TGACGTCCTC GACCAGGTGG TGCGCCTGCG CGAGGAGTAC
GGCTTCGCGA TCGTCTTCAC CACGCACGAT CTGGCCCTGC TGCTGGAGAT CTCCGACTCC
ATCGCCGTGA TGCGGCACGG GCGGCTCGTC GAGTACGGGC CCGCCATGGA CGTCTACCGG
TCCCCGCAGC ACCCGTACAC CAGGACGCTG CTGTCTTCGC TCGAGAACCT GGGGAGCCTC
GCATGA
|
|---|
| Protein sequence | MTISTLVPRG GKVRAGLLIV LVFAALAVFG PMIARFDPSQ TSFEMLEPPS ARHWLGTTQT
GQDVFAQFMT GARTSLLVGL LAGVVSQVVS VAVGLLGGYL RGVADDLLYI LTAVFLVIPG
MPILIVLTGY LPSRGLLSIA IVIAITSWAG SARVIRAQTL SLRNREFVEA ARATGESRIR
IMFFEVLPNM LPLVASGFLF SVIGGILAEA GLAFLGLGSL TTTSWGSMLY FAQNSQALLA
GAWWWYVPPG LAIAVIGAGL ALINFAIDEY SNPRLRTGAA VRKGAAARAA GGDATSTDAQ
ASGIGSTGPR RPGGATGATA EHVALTDDRA PAGTEQREDP ELAPRLRPSP MPGSPIIEVD
ALHVDYPTGF GTVHAVEDVS LTLRRGEILG LAGESGSGKS TLTNAITRLL RPPAEITDGS
ITYRAEDGTA TDLLHLEDRE LRALRWNEIA VVFQSAMNAL NPVTSIHAQF DDVIRVHRPG
LPPARRTEIA KEHLRRVGID PSRIDAYPHE LSGGMKQRVA IAIALVLEPD VIFMDEPTTA
LDLLVQRDVL DQVVRLREEY GFAIVFTTHD LALLLEISDS IAVMRHGRLV EYGPAMDVYR
SPQHPYTRTL LSSLENLGSL A
|
|---|
| |