Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_18550 |
Symbol | |
ID | 8400401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 2076062 |
End bp | 2076676 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644997918 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_003155264 |
Protein GI | 257069009 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCCT TCACCACCCA CACCGGGATC GGCGTCCCGC TGCGCCGCAG CAACGTCGAC ACCGACCAGA TCATCCCCGC CGTCTACCTA AAGCGCGTCA CCAAGACCGG CTTCGACGAC GGCCTGTTCA ACGCCTGGCG CACGAACGAC CCCGAGTTCG TGCTCAACAA GCCCGCCTAC GCCAAGGGCT CGGTGCTCGT GGCCGGCCCC GACTTCGGCA CCGGCTCCTC CCGCGAGCAC GCCGTCTGGG CGCTGCGCGA CTACGGCTTC AAGGCGGTGC TCTCCACCCG CTTCGCGGAG ATCTTCCGCG GCAACGCCGG CAAGCAGGGC CTGGTCGCGG GCATCCTGTC CCAGGACGAT CTCGAGCAGC TGTGGAAGAT CCTCGAGGAG AACCCCGGCA CCGAGGTGAC GATCGATCTC GAGAACCGGC AGGCCCACGC CGGTGAGGCG ACCTTCCGCT TCGAGATCGA CGACTACACC CGCTGGCGCC TCATGGAGGG GCTGGACGAC ATCGGCCTGA CCCTCCGCCA CGAGCAGGAC ATCACCGACT TCGAGGCGAC GCGACCCGCC TGGATGCCGA AGACCCTGCC GGCGCGCACG GCCGACACCC CCTGA
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Protein sequence | MEAFTTHTGI GVPLRRSNVD TDQIIPAVYL KRVTKTGFDD GLFNAWRTND PEFVLNKPAY AKGSVLVAGP DFGTGSSREH AVWALRDYGF KAVLSTRFAE IFRGNAGKQG LVAGILSQDD LEQLWKILEE NPGTEVTIDL ENRQAHAGEA TFRFEIDDYT RWRLMEGLDD IGLTLRHEQD ITDFEATRPA WMPKTLPART ADTP
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