Gene Bfae_18550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_18550 
Symbol 
ID8400401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2076062 
End bp2076676 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID644997918 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_003155264 
Protein GI257069009 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCT TCACCACCCA CACCGGGATC GGCGTCCCGC TGCGCCGCAG CAACGTCGAC 
ACCGACCAGA TCATCCCCGC CGTCTACCTA AAGCGCGTCA CCAAGACCGG CTTCGACGAC
GGCCTGTTCA ACGCCTGGCG CACGAACGAC CCCGAGTTCG TGCTCAACAA GCCCGCCTAC
GCCAAGGGCT CGGTGCTCGT GGCCGGCCCC GACTTCGGCA CCGGCTCCTC CCGCGAGCAC
GCCGTCTGGG CGCTGCGCGA CTACGGCTTC AAGGCGGTGC TCTCCACCCG CTTCGCGGAG
ATCTTCCGCG GCAACGCCGG CAAGCAGGGC CTGGTCGCGG GCATCCTGTC CCAGGACGAT
CTCGAGCAGC TGTGGAAGAT CCTCGAGGAG AACCCCGGCA CCGAGGTGAC GATCGATCTC
GAGAACCGGC AGGCCCACGC CGGTGAGGCG ACCTTCCGCT TCGAGATCGA CGACTACACC
CGCTGGCGCC TCATGGAGGG GCTGGACGAC ATCGGCCTGA CCCTCCGCCA CGAGCAGGAC
ATCACCGACT TCGAGGCGAC GCGACCCGCC TGGATGCCGA AGACCCTGCC GGCGCGCACG
GCCGACACCC CCTGA
 
Protein sequence
MEAFTTHTGI GVPLRRSNVD TDQIIPAVYL KRVTKTGFDD GLFNAWRTND PEFVLNKPAY 
AKGSVLVAGP DFGTGSSREH AVWALRDYGF KAVLSTRFAE IFRGNAGKQG LVAGILSQDD
LEQLWKILEE NPGTEVTIDL ENRQAHAGEA TFRFEIDDYT RWRLMEGLDD IGLTLRHEQD
ITDFEATRPA WMPKTLPART ADTP