| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_17890 |
|---|
| Symbol | |
|---|
| ID | 8400335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 2007011 |
|---|
| End bp | 2008594 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644997852 |
|---|
| Product | ABC-type sugar transport system, periplasmic component |
|---|
| Protein accession | YP_003155199 |
|---|
| Protein GI | 257068944 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCCC GTCGCCAATT CACCCTCGGT GCCACCGCCC TCTCCCTCAC CGCCGGCCTC
GCGGCCTGCG GCCGCCCCTC CGCGACCGAG ACGGAGGACA AGTCCTCCGA CGTCGGCCTC
ACCGACTCCG GCCTCCCGGT CGTCACCGGT GACCTCACCC TCCGCTTCGG GGGCGGGAAA
TCCGCCCTCG CCCCCGACTA CGAGTCGATG GAGCTGGTCA AGACCTGGAC CGAGGATTCA
GCCATCACCA TCGACTGGGT CAACGAGCCG GACGAGGTCT GGGCCGAGAA GAAGAACCTC
CTGATGGCCA GCGGCGAGCT GCCCGACGCC CTGTTCAACA CGGGGCTCTC CGACGCCGAG
ATCGCGAAGT ACGGCGCCAA CGGCACGCTC GTCGCCCTCG AGGAGATGAT CCCCGAGCAC
GCCCCCACCC TCCACGGCAT CCTCGAGGAG CGCCCTGACA TCCGCTCCGC GATCACCGCC
TCGGACGGCC ACATCTACTC GCTGCCCAGC GTCGAGGAGC TCGGACTCGT CGAATTCCCG
AGCATGCTCT TCCTCAACAC CGACTGGCTC GAGCAGCACG GCCTCGACAT GCCGACCACG
GTGGACGAGT ACCACGAGAC GCTGCTGGCC TTCAAGGAGG ACGGCCCCTC GGGCGTCCTG
CCCCTGTCCT TCATGGGGGC CGAGAACATC GCGGATCTCA TCGCGGCGAT CGGCGGCCAG
GCCGACAACC CCGACCACCG CATCGTCCAG GACGGCAAGG TCCTGTTCAC GGCGGACAAG
GACGGCTTCG CCGACGCGAT CGCCACCCTC CACACCTGGT ACCGCGAGGG CCTCATCGAC
CAGGAATCCT TCGCCCAGGA CTACGTCAAG TTCATCGCGA AGGGCAAGGC GGATCCGCAG
ACTCTCGGCT CCTTCTTCTT CTGGGAGATC ACCGAGGTGG TCGGCTACGA GCGCGCCGAT
CAGTACCAGA TCGTGCCGAT CTTCCCCGGC CCCGACGGCG TGCAGCGGGC CTGCGTCGCC
AACAACCAGG AGATCAACCG CGACGCCTTC GCGATCAGCC GCACCAACGA GTACGCCGCG
GCGACGCTGC GCTGGGCCGA CATGCTCTTC GACCCCGTCA TGAGCGCGCA GGCGAACTGG
GGTCCGCTCG GCATCGCCCA GGAGATGAAC GACGACGGGA TGCTCGAGCA GATCCCCGTC
GCCGACGGCG AGAGCGAACA GGAGCGCCGC GTGAAGGTCG CCCCGGGCGG CCCGAAGATC
ATCACCGCGG AGGACTTCGA GACCGTCGTG CTGCCCGAGC CGCGCGCCGC CGAGCGCCAG
GAGCAGATCG CCGAGTTCTA CGAACCGCAC CGTGCGAACG AGAAGTACCC GCCGGTGATG
CTGTCGGTCG AGGAGCTGAA CGAGATCAGC ACCATCGAGG CCGACGTGAA GACCCTCGTG
GACGAGAAGA TCTCGACCTG GATCGTCAAG GGCGGCATCG AGGAGCAGTG GGACGGCTAC
GTCGCCCAGC TCGAATCGAT CGGCCTGCCC GAGATGATCG AGGTCTACCA GACCGCCTAC
GACCGCTACA TCGACAACGC CTGA
|
|---|
| Protein sequence | MLSRRQFTLG ATALSLTAGL AACGRPSATE TEDKSSDVGL TDSGLPVVTG DLTLRFGGGK
SALAPDYESM ELVKTWTEDS AITIDWVNEP DEVWAEKKNL LMASGELPDA LFNTGLSDAE
IAKYGANGTL VALEEMIPEH APTLHGILEE RPDIRSAITA SDGHIYSLPS VEELGLVEFP
SMLFLNTDWL EQHGLDMPTT VDEYHETLLA FKEDGPSGVL PLSFMGAENI ADLIAAIGGQ
ADNPDHRIVQ DGKVLFTADK DGFADAIATL HTWYREGLID QESFAQDYVK FIAKGKADPQ
TLGSFFFWEI TEVVGYERAD QYQIVPIFPG PDGVQRACVA NNQEINRDAF AISRTNEYAA
ATLRWADMLF DPVMSAQANW GPLGIAQEMN DDGMLEQIPV ADGESEQERR VKVAPGGPKI
ITAEDFETVV LPEPRAAERQ EQIAEFYEPH RANEKYPPVM LSVEELNEIS TIEADVKTLV
DEKISTWIVK GGIEEQWDGY VAQLESIGLP EMIEVYQTAY DRYIDNA
|
|---|
| |