| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_13000 |
|---|
| Symbol | |
|---|
| ID | 8399847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1463226 |
|---|
| End bp | 1463945 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644997368 |
|---|
| Product | ABC-type sugar transport system, periplasmic component |
|---|
| Protein accession | YP_003154733 |
|---|
| Protein GI | 257068478 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.156871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCCGC TCGCGCGGCG CGCCTTCCTC GGACGAAGTG CCGCAGTGGG AGCTGCCGCG
GTCGCTGCCC CGCTGGCGCT GAGCGCCTGC GGCGGGTCCG ACGAGAACGA GGAGACCACC
GGGGGCGACG ACTACGAACC CGGCAGCGCG AGCCTCCAGG TCGAGATCGC TCCGGAGATC
GAGGGCGTGA ACTACCCCGA GGACTATGTG GGCCCGCGGG CACGGGAGCT CGAGCCGTTC
GGCGACGGGG AGACCGAGTT CTCGATGCTC ACCCAGACCG ATCCCGGGAT GGACTTCACG
ACGAACTACT ACTCGCAGCA CGTCGAGGAG ACCACCGGCG TGAAGGTCTC CTACCTCACC
GTCCCCGCCG GCGAGGACGG CAAGACCAAG GTCAACGCGA TCGTCGCGGG CGGCGATCTC
CCCCACGCGA TGATGGTGGG CCAGGACATC TTCAACCTCT CGGAGATCAG CATCTACAGC
GAGCAGGGGC TGTTCCTCCC GCTGGACAAG CTGATCGACG AGAACGCACC GCACATCGTG
GACATGTTCA CGGACTTCCC GGACATGCGC CAGCAGTACT CCTCCCCCGA TGGCAAGCTC
TACGCCGTCC CGTCGATGAA CGACTGCTAC CACTGCAAGG CCGCCAATGT GCGCACCTGG
ATCAACTCCC GCTGGCTCGA GGGTGTCGGT GCGGAGGCGC CCCAGACCCT CACGGAGTAG
|
|---|
| Protein sequence | MPPLARRAFL GRSAAVGAAA VAAPLALSAC GGSDENEETT GGDDYEPGSA SLQVEIAPEI
EGVNYPEDYV GPRARELEPF GDGETEFSML TQTDPGMDFT TNYYSQHVEE TTGVKVSYLT
VPAGEDGKTK VNAIVAGGDL PHAMMVGQDI FNLSEISIYS EQGLFLPLDK LIDENAPHIV
DMFTDFPDMR QQYSSPDGKL YAVPSMNDCY HCKAANVRTW INSRWLEGVG AEAPQTLTE
|
|---|
| |