| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_12380 |
|---|
| Symbol | gcvT |
|---|
| ID | 8399785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1392856 |
|---|
| End bp | 1393989 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644997306 |
|---|
| Product | glycine cleavage system aminomethyltransferase T |
|---|
| Protein accession | YP_003154671 |
|---|
| Protein GI | 257068416 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0676633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGC AGGACCTGCG CAGCACCGCC CTCGAGGCGG TCCACGAGTC GCTCGGGGCG
ACCTTCACGG ACTTCGCGGG GTGGCGGATG CCGGTGAGGT ACGACTCCGA CCTCGCGGAG
CATCGGGCGG TGCGCGAGAG CGCGGGCATC TTCGACCTCA GCCACATGGG CGAGGTCCAC
CTGCGCGGCC CCCAGGCGGC GGAGGCCCTC GACCATGCCC TGGCCGGGAA GATGTCCGCC
ATGGCGGTGG GGCGCGCGAA GTACTCGCTG CTGCTCACCG AGGACGGCGG CGTGATCGAC
GACGTCATCA CCTACCGGCT CGCCGAGGAC CACTTCCTGG TGATCCCCAA CGCCTCCAAC
GCCGAGGTCG ACGCCGCCGA GCTCCGCACC CGCGCCGCAG GCTTCGACGT CGAGGTGGAC
GACGCCTCGG ACCGCACCTC CCTGATCGCC GTGCAGGGCC CGGCCAGCGA GCAGATCCTG
CGGGACGCGC TGACGGCGGA GGGCTCCGGC GTCGAGGGGC TGGGCGACGA GGACCTCACG
GGGATGAAGA ACTACCGCTT CGCCGTCGCC TCCTTCCACG GCCGGGACCT GCTGGTCGCC
CGCACCGGAT ACACCGGGGA GGACGGTTTC GAGCTGTACG TCCCCGACGC GCAGGCCACC
GCGATGTGGG AGCTGCTCAC CACCGCCGGC GGCGAACGGC TCACGCCCTG CGGCCTCGCC
TGCCGCGACA CGCTCCGCCT CGAAGCGGGG ATGCCGCTGT ACGGCAACGA GCTCAGCCGC
GCGCTGCACC CCGCACAGGC CGGGATGGGG CGCGTCGTGG CGCTGAAGTC CAAGGGAGAC
TTCGTCGGCC GCGCCGGCGT CGAGCACGCC GACGTCGCCG ACCTGCCCGT GCTGGTGGGC
CTCGCCGCCG AGGGCCGCCG CGCCGCTCGC GCCGGCGCCA CCCTCCGCGA CGGCGACGGA
GCGGAGGTCG GCACCATCAC CTCCGGTGCG CTGGCCCCGA CGCTCGGCCA CCCGATCGCG
ATGGCCTACG TCTCGCCGGC CGTCCGCGAG GTCGGCACCG TGCTGAACGC CGACGTGCGC
GGCAAGGACC TGCCCGTGCG CGTGGTCGAG ATGCCCTTCT ACACGCGCGG CTGA
|
|---|
| Protein sequence | MVEQDLRSTA LEAVHESLGA TFTDFAGWRM PVRYDSDLAE HRAVRESAGI FDLSHMGEVH
LRGPQAAEAL DHALAGKMSA MAVGRAKYSL LLTEDGGVID DVITYRLAED HFLVIPNASN
AEVDAAELRT RAAGFDVEVD DASDRTSLIA VQGPASEQIL RDALTAEGSG VEGLGDEDLT
GMKNYRFAVA SFHGRDLLVA RTGYTGEDGF ELYVPDAQAT AMWELLTTAG GERLTPCGLA
CRDTLRLEAG MPLYGNELSR ALHPAQAGMG RVVALKSKGD FVGRAGVEHA DVADLPVLVG
LAAEGRRAAR AGATLRDGDG AEVGTITSGA LAPTLGHPIA MAYVSPAVRE VGTVLNADVR
GKDLPVRVVE MPFYTRG
|
|---|
| |