Gene Bfae_10770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_10770 
Symbol 
ID8399625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1209918 
End bp1211405 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content75% 
IMG OID644997150 
ProductUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 
Protein accessionYP_003154515 
Protein GI257068260 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCAGA CCACGGCACG GGAGATCGCT GCCGTCACCG GCGGCGAACT CGTGGGAGGC 
GCGACCGGTG ACGAGCTCGT CACCGGCACC GCCCGCATCG ATTCACGCGA GGTGGGCCCC
GGAGACCTGT TCGCCGCCTT CCTCGGCGAG CACGTCGACG GCCACGACTT CCTCGACGCC
GCCCGCACCG CGGGCGCCGC CCTCTCCCTG GTGACCGACG CCGCCGCGGC CGCCGAGCAC
TCGCTGCCCG CGGTGCGCGT CGACGACGTG CGCGACGCGC TCGCGGCACT CGCCCGCGCC
CAGCTCGCCC GCGCCCGCCA GGAGAACCCC CAGCTGGTGG TCCTCGCCGT CACCGGCAGC
GCCGGCAAGA CCGGCACCAA GGACCTCCTC GGCACGATCC TGCGCAGCGC CGGGCCCACA
GTCGCCCCCG TCGGCAGCTT CAACAACGAG CTCGGCCTTC CGCTGACCGT CCTGCAGGTG
ACGGGCGAGA CCCGCTTCCT GGTGCTCGAG ATGGGTGCCC GCGGCATCGG GCACATCGCC
GAGCTCACCG AGATCGCCCG CCCGGACGTC TCCCTGGTGC TCAACGTCGG CTCCGCCCAC
CTCGGGGAGT TCGGGAGCGT CGACGCGATC GCCCGCGCCA AGGGCGAGCT GGTCGACGCG
CTCGCCCCCG GCGGTCGGGC GATCCTCAAC GCCGAGGACC GCCTCGTCGC CGCGATGGCC
GAACGCTCCG CCGCCCCGGT CGTGACGTGG GGCTTCACCA CGGGCGACGT GCGCGGCGCG
GAGCTCACCC TGGACGAGCA GGCCCGGGTG GCGTTCACGC TCGAGGTGCC GGCAGGGCTC
ACCACGCTGC ACGGCGACGC CGTCGCACCG GGGTCCTTCC CGGTCCGGCC GGACCTGCTG
GGCGAGCATC AGGCCGCGAA CGTGCTCGCG GCGCTCACCG CCGCCCTGAT GGCCGGGGTG
GACTCCGCCT CGGCGACCGC CGCCCTCGAC GGCGCGACCC TGGCCTCCGG CCAGCGGATG
CAGGTGCTGC GCGCCGGCGG CGCGCTGATC ATCGACGACG CGTACAACGC GAACCCCGAC
TCGCTGCGGC AGGCGCTGAA GACCCTCGCC CACCTCGGCC GGCGGCACCG CACCATCGCC
GTGCTCGGCG AGATGCTCGA GCTGGGCCCC GACACGGTGC GGCTGCACGA CGAGATCGGC
CGCCTCGCCG TGCGCCTGAA CATCGGGCAG CTGTACGTGG TGGGGGAGGG CGCCGCCCCG
ATCCATCACG GCGCGAGCCT CGAGGGCAGC TTCGGGGGAG AATCCGAGTA TCTCGACACC
GTCGAGGAGG CGATCGCAGT GCTGGAACGG ATCGTGCAGC CCGGGGACGC CGTGCTGCTG
AAGTCCTCGC GCGACGCGGG ACTGCGGCGC ATCGCGGCCC CGCTCGTCGA GCACCTCGCG
CAGCGCCCCG CGGCCGAGGG CACGACGGGG ACGGGAGCAG CGCTGTGA
 
Protein sequence
MLQTTAREIA AVTGGELVGG ATGDELVTGT ARIDSREVGP GDLFAAFLGE HVDGHDFLDA 
ARTAGAALSL VTDAAAAAEH SLPAVRVDDV RDALAALARA QLARARQENP QLVVLAVTGS
AGKTGTKDLL GTILRSAGPT VAPVGSFNNE LGLPLTVLQV TGETRFLVLE MGARGIGHIA
ELTEIARPDV SLVLNVGSAH LGEFGSVDAI ARAKGELVDA LAPGGRAILN AEDRLVAAMA
ERSAAPVVTW GFTTGDVRGA ELTLDEQARV AFTLEVPAGL TTLHGDAVAP GSFPVRPDLL
GEHQAANVLA ALTAALMAGV DSASATAALD GATLASGQRM QVLRAGGALI IDDAYNANPD
SLRQALKTLA HLGRRHRTIA VLGEMLELGP DTVRLHDEIG RLAVRLNIGQ LYVVGEGAAP
IHHGASLEGS FGGESEYLDT VEEAIAVLER IVQPGDAVLL KSSRDAGLRR IAAPLVEHLA
QRPAAEGTTG TGAAL