Gene Bfae_05500 details

Gene Information

• Locus tag: Bfae_05500
• ID: 8399098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachybacterium faecium DSM 4810
• Kingdom: Bacteria
• Replicon accession: NC_013172
• Strand: -
• Start bp: 638494
• End bp: 639054
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644996634
• Product: RNA polymerase sigma factor, sigma-70 family
• Protein accession: YP_003154006
• Protein GI: 257067751
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGGGG GAGACGCGGA GCATTCGGGG ACGCACGAGG AGGCGGCGCT CTCACGCGTC 
GCCGCACGCG CCGCACAGGG GGACGCCGCC GCGCTCGACG AGCTCATCGA ATCCCTGGAC 
CGCTCGCGGA CTGTGCATCG CATGGTGGGG TCGATGCTCC TGGACCAGCA CGCCGTCGAT 
GACGTCTCCC AAGAAGTGCT CATCTCGATC ATGGGGTCGA TCGGGCAGTA CCGGGGCGTC 
GGCAAGGTCT CCAGCTGGGT GCACCCGATC GTGAAGCGCC GCGTCGCCGA CCACCTCCGC 
AAGCAGCGGG ACTCCGCCAC GCTCGACGAG GCCGCGCTGC CCGCGCAGCG GATCAGTTCG 
ATGGTCGCCT CCCGCGCCGC GATCCGCACG GCCGTGGCGC AGCTGCCCGA GAAGTATCAG 
GCCCCGCTGA TCCTGCGCGA TCTCGAACAG CTGCCGGTCG CGGAGATCGC CGCGCGCCTC 
GACCTGCCTG AGGGGACCGT GAAGGCCCAG ATCAGCCGTG GCCGGGCGAA GCTCGAGAAG 
ATCCTCGGAG CGATCGACTG A 

 

Protein sequence

MPGGDAEHSG THEEAALSRV AARAAQGDAA ALDELIESLD RSRTVHRMVG SMLLDQHAVD 
DVSQEVLISI MGSIGQYRGV GKVSSWVHPI VKRRVADHLR KQRDSATLDE AALPAQRISS 
MVASRAAIRT AVAQLPEKYQ APLILRDLEQ LPVAEIAARL DLPEGTVKAQ ISRGRAKLEK 
ILGAID