Gene Bfae_01880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_01880 
Symbol 
ID8398736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp212392 
End bp214155 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content67% 
IMG OID644996280 
ProductNa+/proline symporter 
Protein accessionYP_003153656 
Protein GI257067401 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTGA ACGGTCCGTC CGCGACGAAA GGAAGTCCTG TGCCTCCAGC ACCCTCAGGC 
GAGATAGCCC AGCTCGGAAC GCTCGGAGTG ATCCTGCTCC TGCTCCTGTT CTACGGGGGC
ACGATGTGGA TGTCGGTCGC GATCTCCCGC AAGAAGGAGA ACGCCGACGA CTACATGACC
GCCGGGAACA ACATCGGCTT CGGCGTCTCC GCCGCCTCGA TGACCGCCAC CTGGATCTGG
GCGTCCTCGA TGTACGCCTC GGTCACCGCG GGCTACACCT ACGGCGTCTC CGGCCCCATC
CACTACGGGC TCTGGGGCGC GCTGATGATC CTGTTCATCT ACCCCTTCGG CAAGCGGATC
CGTGCCGTCG CGCCCCGCGC CCACACCCTC GCCGAGGTCA TGTACGCCCG CCATGGGCGC
TCCTCGCAGC TGATGCTCGC CGGCTCCAAC GTGCTCGGCT CGGTCATCTC CCTGACCTCG
AACTTCATCG CGGGCGGCGC GATCATCGCG ATGCTCTCCC CGCTGAGCTT CGGCGCCGGC
ATCCTGATCA TCGCCGGCGG CGTGCTGCTG TACACCCTGT GGTCCGGCTT CCGCGCCTCC
GTGCTCACCG ACTTCGCGCA GGTCATGGCG ATGCTCGGCG CGGCCGTCAT CATCATCCCC
GCCGTGTTCT TCCTCGCCGG CGGGCCGTCG ATGTTCGCCG ACGGGGTCGC CAGCGGCGCC
GTCACCCCGG AGCAGGAGAG CTTCTTCTCC TCGGACGCCT TCATGAACCA GGGCGCCCCC
TACATCGCCG CCGTGCTGGC CTACGCGATC GGCAACCAGA CCATCGCCCA GCGCCTCTTC
GCGGTGCGCG AGGACCTCAT CAAGCCCACC TTCATCACCG CCACCGTCGG CTACGGCGGC
ACCGTGATCG GTATCGGCAT GCTCGGCGTG ATGGCGCTGT ACCTGGGCAT CGAGCCCATG
GGCGGCGACG TCAACAACCT GATGCCGCAG ATGGTGGGCA CCTACCTGCC CGTCGTGCTG
GTGGCGCTCG CGTTCATCAT GATCATCGGC TCGCTCTCCT CGACCGCGGA CTCCGACCTC
GCGGCCCTCA GCTCGATCGT CATGACCGAC ATCTACGGCC AGTCCGTCGG CCGCGGCAAG
GCGAACCCCA AGCTGATGCT GCTGATCGGC CGGATCACCA TGATCGTGGC CACCGGGCTC
GCGCTGTTCT TCGCCACCGC CCGCTTCAAC ATCCTGGACC TGCTGGTCTT CGTGGGCGCG
CTGTGGGGCT GCCTGGTGTT CCCGGTCATC GCGTCCTTCT ACTGGAAGAA GGTCACCAAC
CGCGCCTTCA CGATCTCCGT GATCGCGGCG CTGGCGATCT TCCTGCCGGT GCGCTTCACG
CTCGTCCCGC TCACCGGGGC GTGGGGGCTG TTCGTCGAGC TGCTCGCCAT CATCGGCGTG
GGCGTGGTGC TGGGCATCAT GGCCTTCGGC TTCTTCGGGC TGCGCCCGGC GGTGATCGTC
GGCGCCGTCG CCACCCTGGT CGTGCTGCCG TTCGGCTTCG GGTACCTGCG CGACTTCGAG
ACCCTCACCG GCTCGCTGGT CGCCTACTCG GTCTCGTTCC TGGTCTGCTA CCTGCTGAGC
GTCCGCTCCT CGCAGAACTT CGACTTCTCG GTGATCCGCA AGGTCACCGG CGACTTCGAC
GAGGAGACGC CCACCGCGGA GGCCGATGAG GCTGACGAGG GCGACGAGGA CCGCACCGCG
GTCCCCACCG GCTCCGACCG CTGA
 
Protein sequence
MHVNGPSATK GSPVPPAPSG EIAQLGTLGV ILLLLLFYGG TMWMSVAISR KKENADDYMT 
AGNNIGFGVS AASMTATWIW ASSMYASVTA GYTYGVSGPI HYGLWGALMI LFIYPFGKRI
RAVAPRAHTL AEVMYARHGR SSQLMLAGSN VLGSVISLTS NFIAGGAIIA MLSPLSFGAG
ILIIAGGVLL YTLWSGFRAS VLTDFAQVMA MLGAAVIIIP AVFFLAGGPS MFADGVASGA
VTPEQESFFS SDAFMNQGAP YIAAVLAYAI GNQTIAQRLF AVREDLIKPT FITATVGYGG
TVIGIGMLGV MALYLGIEPM GGDVNNLMPQ MVGTYLPVVL VALAFIMIIG SLSSTADSDL
AALSSIVMTD IYGQSVGRGK ANPKLMLLIG RITMIVATGL ALFFATARFN ILDLLVFVGA
LWGCLVFPVI ASFYWKKVTN RAFTISVIAA LAIFLPVRFT LVPLTGAWGL FVELLAIIGV
GVVLGIMAFG FFGLRPAVIV GAVATLVVLP FGFGYLRDFE TLTGSLVAYS VSFLVCYLLS
VRSSQNFDFS VIRKVTGDFD EETPTAEADE ADEGDEDRTA VPTGSDR