Gene BcerKBAB4_5532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5532 
SymbolxerS 
ID5839649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp133250 
End bp134356 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content34% 
IMG OID641374693 
Productsite-specific tyrosine recombinase XerS 
Protein accessionYP_001642489 
Protein GI163943259 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000644958 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGCAATC GAGAAAAACA AGTGTATCAA GCACGTGTAG AACGTCATAA AGAAAAAATG 
CCTTGGTATA TCATTGAATA TATTGAAGAG AAAACGAACC TCTCCCCTGC TACTTTGTAT
GGATACTTAA TTGAATATGA AATGTTTTTA CAATGGTTAA TCTCCTCTCG TCTTGCCGTC
GCAGATGGAG AAGTTGTTAC GAAAATACAT GAGGTACCAA TTGACACATT GGAACATCTT
CCTCTTAAAC AAGTAAAAAG ATTTAAAAGT TATTTAGAGA GACAAGGTAA TAAAACAAAG
GCAGTTATTC GAACATTTTC AGCTCTAAAA TCATTATTTT ACTACCTAAC GAGCAACACT
GAAGATGATA ATGGAGAATG TTACTTTTAT AGAAATGTTA TGGCCAAAAT GGAAATTCAT
AAGGAAAAAA TTGACGCTGC AGCAAGAGCA AAAGAAATTT CTGAAGTTAT TTTCCACAAT
AATGATGACA TTAAATTTAT GCGCTTTTTA TCTAATGAAT ATGAGCAAAT GCTGCAAGAA
AATGCTCCTG GTAAGTTAAG ATTCTTTAAA CGCGATAGAG AGCGTGATAT TGCTATTCTA
AGTTTAATCT TAGGTACAGG CCTTCGGGTC TCAGAAGCGG CTAGTTTAAC TATTTCTAGT
GTTAATTTTC GTACTCGTTA TATTAAAGTC GTACGCAAAG GAGATAAAAA ATCAGCTATT
TTAGCAACAC AAACAGCCCT TGATGATGTT CAAGAATATC TTAAAGTACG TGCTGTTCGT
TACAAGTGTC CTGAAGATGA AGACATTCTA TTTGTAACGA ATTATAAAGG CTCATACGCG
CAAATTTCTG TTAATGCAAT ACAAAAGTTT ACAGAGAAAT ATACTAGAGC ATTTGACGAA
AAAAAGAGCC CTCACAAGTT ACGTCATACA TATGCGACTA ATCATTATAA TGAAAATAAA
GATTTGGTTC TGTTAGCAAA TCAAATGGGG CATAATTCGA TGGAAACTAC CTCTCTTTAT
ACGAATATTG ATGATACTAA ACGTCGAGCT GCAATTGAGC GTTTAGAACA ACGTCAATTA
GAAGAAAATG ATGAAATTGA TACATGA
 
Protein sequence
MSNREKQVYQ ARVERHKEKM PWYIIEYIEE KTNLSPATLY GYLIEYEMFL QWLISSRLAV 
ADGEVVTKIH EVPIDTLEHL PLKQVKRFKS YLERQGNKTK AVIRTFSALK SLFYYLTSNT
EDDNGECYFY RNVMAKMEIH KEKIDAAARA KEISEVIFHN NDDIKFMRFL SNEYEQMLQE
NAPGKLRFFK RDRERDIAIL SLILGTGLRV SEAASLTISS VNFRTRYIKV VRKGDKKSAI
LATQTALDDV QEYLKVRAVR YKCPEDEDIL FVTNYKGSYA QISVNAIQKF TEKYTRAFDE
KKSPHKLRHT YATNHYNENK DLVLLANQMG HNSMETTSLY TNIDDTKRRA AIERLEQRQL
EENDEIDT