Gene BcerKBAB4_5515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5515 
Symbol 
ID5839625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp116476 
End bp117219 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content40% 
IMG OID641374679 
Producttriple helix repeat-containing collagen 
Protein accessionYP_001642475 
Protein GI163943245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.742709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.284565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTTAG GGGGGGGATA TATGGAGAGG AAAAATAAAT GGTACGGATT AAACTCTAAT 
GTAAATCTAT CTGCAAGTTC ATTTGATCCT AACTTGGTAG GGCCTACATT GCCACCGATT
TCACCAATTT CTGTACCAAC CGGTCCAACG GGAGAAACAG GTATAACAGG CCCAACAGGC
CCAACCGGTC CAACCGGTCC AACGGGAGTA ACGGGTATAA CAGGCCCAAC CGGTCCAACG
GGAGCAACAG GTATAACAGG CCCAACCGGT CCAACGGGAG AAACGGGTAT AACAGGCCCA
ACTGGACCAG GTCCAACTGT GAGTCTTAAA TTTCTTTATG TAGCAAATTT TAATGAAAAT
ACGGTAGAAA TTTATGATAT TTTCAATCCA ATATTTCCAG TACGTATTGG AGAGTTTAAT
GGTGGGAATT TAGCTAATCC TGCTGGATTA GCTATTACAG GAACCACTCT TTATGTAACA
AATAATGGAG ATAACACGGT AGAAATTTAT GATATTTTGA ATCCGATAGC TCCAGTACAT
GTTGGAGAGT TTAATGGTGG AAATTTAAGT GAACCTGATG GGTTAGCTAT TACAGGAACC
ACTCTTTATG TAGCAAACTT TAATGATAAT ACGGTAGAAA TTTATGATAT TTTGAATCCG
ATAGCTCCAG TACGTGTTGG AGAGTTTAAT GCAGGAAATT TAAGTAGTCC TGCTGGATTA
ATCATTTTTT CGTTATTCGG TTAG
 
Protein sequence
MFLGGGYMER KNKWYGLNSN VNLSASSFDP NLVGPTLPPI SPISVPTGPT GETGITGPTG 
PTGPTGPTGV TGITGPTGPT GATGITGPTG PTGETGITGP TGPGPTVSLK FLYVANFNEN
TVEIYDIFNP IFPVRIGEFN GGNLANPAGL AITGTTLYVT NNGDNTVEIY DILNPIAPVH
VGEFNGGNLS EPDGLAITGT TLYVANFNDN TVEIYDILNP IAPVRVGEFN AGNLSSPAGL
IIFSLFG