| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_3902 |
|---|
| Symbol | |
|---|
| ID | 5844114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 3939253 |
|---|
| End bp | 3940779 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641379020 |
|---|
| Product | sodium:neurotransmitter symporter |
|---|
| Protein accession | YP_001646698 |
|---|
| Protein GI | 163941814 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.973236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGA GGCAACAATG GGGAACGAGG GCTGGATTTA TTTTTGCAGC AATCGGTTCC
GCTGTTGGAC TAGGGAATAT ATGGCGTTTT CCTTATACAG CGTATGAAAA TGGGGGAGGC
GCATTCTTTT TACCGTACTT ATTTGCATTA TTAACGACTG GTATTTCATT GTTAGCTTTC
GAGTTTGCTC TTGGGCATCG CCATCGTGGT TCGGCGCCAC TTACATTCTT CCGTATTCAT
CGACGTGCTG AATTTATTGG ATGGTGGCAA ATGTGTGTGA CATTTATTGT TTCAACATAT
TACGCTGTAA TCATTGCTTG GTCTATTTCG TATACGTACT TTGCAATTAC TGGAGCATGG
GGGAAAGACA CGCAATCATT TTTATTTAAA GAATATTTAC ATGTTGCAGA TAAGCCAGGA
CAATTCGGGG GGCTCGTACC AGAAGTATTA ATTCCGTTAG CTCTCGTTTG GATTATTGTG
CTTGGTGTTG CGTTTAAAGG AGTTAAAAAA GGAATCGAAG TTGTTAACCG TATTTTTATT
CCTTTACTAG TTGTTATGTT CCTTATTATC GTTGTTCGTG CAGTGACGAT GGAAGGTGCG
ATGCAGGGGC TAGATGCATT TTTTAAACCA GATTGGAGTC GTATTTTTGA TGGGAAAGTA
TGGCTTGCTG CTTACGGTCA AATTTTCTTT AGTTTATCTT TAGCATTCGG AATTATGATT
ACGTATTCTA GTTATTTACC GAAAAACTCA GATACAACAA ATAATGCTTT TATTACAGGA
TTTGCAAATT CAGGATTTGA ATTATTGGCA GGTATTGGTG TCTTTGCAGC TCTTGGATTT
ATGGCGAATA ACATGGGGGT ACCGGTTGAT AAAGTAGCTA GTGCTGGTGT AGGACTTGCA
TTTGTAGTAT TCCCGCAAAT TATTAATGAG TTACCGATGT CGCCGTTATT TGGTGTATTA
TTCTTCTTAT CTCTAACTGT TGCTGGAATT ACATCACTCA TTTCACTTGC AGAAGTATGC
TTTGCCGCTG TATCTGAAAA ATTCAGCTTG AGTCGTCAAA AGACGATTGG AATTATGGGA
ACGCTATTAG TATTAGTTTC TCTTGTTTTT GCAACACGTG GTGGACTTAT GTTCCTAGAT
GTTGTTGATT ACTTCGCTAA CAATTTTGGA TTGATTACAA TTGCACTCGT TGAAGTAGTT
ACAATAGGAC TAATCTTGCG CCGTTTACCA GTTTATCAAA ATCATGCAAA CTTTGTATCT
GATATAAAGT TAGGAACGTT TTGGAGAGTG AGTTTACTCG TTATTACTCC ACTTATGTTA
GGGTATATGT TAATTGATGG TACAATCCAA AACATTAAAA AGAACTACGG AGGTTATCCA
ACAGAGTTTG TTGTAACGTA TGGTTGGTCG ATAGCGGCAG CATTCCTTCT AGTCGCGTTA
GTTATTGGTC TGAAAAAATG GAATGCACAA ATACATTCAG ACTCTGTCCA GCTTGAAAAA
GAATGGAAGG ACCGAGGTGT TTCATGA
|
|---|
| Protein sequence | METRQQWGTR AGFIFAAIGS AVGLGNIWRF PYTAYENGGG AFFLPYLFAL LTTGISLLAF
EFALGHRHRG SAPLTFFRIH RRAEFIGWWQ MCVTFIVSTY YAVIIAWSIS YTYFAITGAW
GKDTQSFLFK EYLHVADKPG QFGGLVPEVL IPLALVWIIV LGVAFKGVKK GIEVVNRIFI
PLLVVMFLII VVRAVTMEGA MQGLDAFFKP DWSRIFDGKV WLAAYGQIFF SLSLAFGIMI
TYSSYLPKNS DTTNNAFITG FANSGFELLA GIGVFAALGF MANNMGVPVD KVASAGVGLA
FVVFPQIINE LPMSPLFGVL FFLSLTVAGI TSLISLAEVC FAAVSEKFSL SRQKTIGIMG
TLLVLVSLVF ATRGGLMFLD VVDYFANNFG LITIALVEVV TIGLILRRLP VYQNHANFVS
DIKLGTFWRV SLLVITPLML GYMLIDGTIQ NIKKNYGGYP TEFVVTYGWS IAAAFLLVAL
VIGLKKWNAQ IHSDSVQLEK EWKDRGVS
|
|---|
| |