| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_3271 |
|---|
| Symbol | |
|---|
| ID | 5843483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 3325248 |
|---|
| End bp | 3326963 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641378397 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001646075 |
|---|
| Protein GI | 163941191 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00499057 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGAA AAAAGATGAA AAAGTTAACA GCGGTTGTAG TACCAGTTTT AGCAATGAGT
GTTGCATTGA CAGCGTGCTC TGGATCAGGT GGGGAGAAGA AAACGACTAC TACATCTAAT
AGTGGGGAAG AAAAAAAAGC TGATATTAAA TATGCAGCGA AGCAAGTATT AAATCGTACG
GAAAATCAAG AAATTCCGAC GATGGACACT TCTAAATCTA CTGATACGTT AGGGGCACAA
ATTTTAGGGA ACACAATGGA AGGATTATAT CGTCTTGATA AAGATAATAA GCCTATTCCG
GCTGCTGCAG AATCAAGTAC GAAAAGCGAA GATGGTAAAA AATATACGTT TAAACTGCGT
AAAGATGCAA AATGGTCAAA TGGAGAGCCT GTAACAGCGA AAGATTTCGT ATACGGATGG
CAGCGCTTAC TTGATAAAAA CACAGCGGCA GAATATGCGT TTATTGCCTA CTATATTAAA
AATGCAGAGG CAATTAATAA AGGTGAAAAA CCTGCAACGG AATTAGGTGC AAAAGCGGTA
GATGATTATA CACTTGAAGT AGAATTAGAC AAACCAGTAC CATATTTCTT AAACTTATTA
GCATTCCCGT CATATTATCC TTTAAATGAA AAGTTCGTAA AAGAAAAAGG AGAGAAATTC
GGTTTAGAAG CAGATACAAC ATTGTATAAC GGGCCATTTG TAATGGCATC GTGGAAACAT
GAACAAGGTT GGCAGTTGAA GAAAAATGAT AAATATTGGG ATAATAAGAC TGTGAAATTA
GAAGAAATTA ATTACAGCGT TGTAAAAGAA GTTGCTACAA AAGTAAATTT ATATGATACA
GGATCAATTG ATTTCACACT ACTATCAGGA GAATTCGTAG ATAAATATAA ATCGAACAAA
GATGAATATG GTGAGTATTC AGAAGCAAGT ACGTACTTCT TACGTTTAAA TCAAAAGCGT
AACGGACAAG ATACACCGTT AAAGAGTAAA AAGCTTCGTG AAGCAATCGC ATTATCCATT
GATAAAAAAG GTTTAGCAAA CGTTATATTA AATAATGGGT CAAAAGCAAC TGATCAATTG
GTTCCAAAAG GGCTTGCGAC GGGACCGGAT GGTAAAGATT ATCAAGATAC ATTTAAAAAT
GGTCTGAAAT ATGATGTGAA AAAAGGCGCA GCAGCTTGGG AAGAGGCGAA AAAGGAACTC
GGAAAAGATC AAGTTACAAT TGAATTACTA AGCTATGATG ATGGAACTGC GAAAAAGATT
GCCGATTATT TTAAAGATCA AATTGAGAAA AACTTAAAAG GTGTAACAGT TAACACGAAA
ATTCAGCCAT TTAAACAAAA ATTAAAATTA GAGTCAGCGC AAGATTATGA AGTTTCGTTT
GCAGGTTGGA GCCCAGATTA TTCGGATCCA ATGACATTTA TTGATATGTT TGAATCGAAG
AGTCCATATA ACCAAATGAG TTATTCAAAT CCGAAATACG ATGAAATGGT ACAAAAAGCA
GGTAATGAAT TATTGTCTGA TCCGAAGAAG CGCTGGGAAA CATTAGGGAA AGCAGAAAAA
ATATTCCTTG AAGAAGATGC AGGATTAGTT CCTTTATATC AAACAGGAAG ATCATATGTA
ATGAAACCGA ATGTAAAAGG AATTGTGAAA CACAACATTA GTCCAGAATA TAGCTTTAAG
TGGGCGTATG TAACTGAGGA TGGCGGAAAG AAATAA
|
|---|
| Protein sequence | MKRKKMKKLT AVVVPVLAMS VALTACSGSG GEKKTTTTSN SGEEKKADIK YAAKQVLNRT
ENQEIPTMDT SKSTDTLGAQ ILGNTMEGLY RLDKDNKPIP AAAESSTKSE DGKKYTFKLR
KDAKWSNGEP VTAKDFVYGW QRLLDKNTAA EYAFIAYYIK NAEAINKGEK PATELGAKAV
DDYTLEVELD KPVPYFLNLL AFPSYYPLNE KFVKEKGEKF GLEADTTLYN GPFVMASWKH
EQGWQLKKND KYWDNKTVKL EEINYSVVKE VATKVNLYDT GSIDFTLLSG EFVDKYKSNK
DEYGEYSEAS TYFLRLNQKR NGQDTPLKSK KLREAIALSI DKKGLANVIL NNGSKATDQL
VPKGLATGPD GKDYQDTFKN GLKYDVKKGA AAWEEAKKEL GKDQVTIELL SYDDGTAKKI
ADYFKDQIEK NLKGVTVNTK IQPFKQKLKL ESAQDYEVSF AGWSPDYSDP MTFIDMFESK
SPYNQMSYSN PKYDEMVQKA GNELLSDPKK RWETLGKAEK IFLEEDAGLV PLYQTGRSYV
MKPNVKGIVK HNISPEYSFK WAYVTEDGGK K
|
|---|
| |