| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_3018 |
|---|
| Symbol | |
|---|
| ID | 5843230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 3070955 |
|---|
| End bp | 3072124 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641378151 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001645829 |
|---|
| Protein GI | 163940945 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.470862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC GTAGTCAAAT TACATTTGCA AGTCTTGCCC TTTTAATAGC TGGAAGTTCC
CTGTTATATA CAACGCCAGC CTCAATTGTA AAAGCAGAGC CCACTCAAAA TGTATCTAGT
TCGTTACAAA CAAGCACTCA ACGAGATCGT ACTTCCGTCA AGCAAGCAAT GCGGGATACA
TTGCAACTTG GATACCCGGG GATACTTGCT AAAACTTCTG AGGGTGGAAA AACGTGGAGT
TATGCCGCTG GGGTAGCGGA TCTGAGCAGC AAGCAACCAA TGAAAACAGA TTTTCGCTTT
CGCATTGGCA GTGTGACGAA GACGTTCACA GCAACGGTTG TACTTCAATT AGTCGGAGAG
AACCGCTTGA ATCTAGACGA CTACATCGAA AAATGGTTGC CTGGTGTCAT TCAAGGAAAC
GGATATGATG GTAACCAGAT TACTATCCGG CAGATATTGA ACCATACAAG TGGTATCGCT
GAATACTCAA GGTCAAAAGA CGCTGACTTT ACGGATACAA AAAAATCGTA TACGGCTGAA
GAGTTAGTGA AGATGGGGAT TTCTCTGCCC CCAGACTTTG CCCCAGGAAA GGGCTGGTCT
TATTCAAACA CAGGATATGT ATTACTAGGT ATTCTTATTG AAAAAGTAAC CGGAAACAGC
TATGCGGAAG AGATTGAAAG TCGGATTATT GAACCGCTTG AATTGTCGAA TACATTCCTA
CCTGGCAATT CAAGCGTTAT TCCAGGCACC AAGCATGCCC GTGGATATGT CCAACCAGAC
GGAGTAAGTG AGCTAAAAGA CGTTACTTAT TATAACCCAA GTGCAGGTAG CTCAGCTGGA
GATATGATTT CTACTGCTGA CGACTTAAAT AAATTCTTCT CTTACTTGCT CGGGGGTAAA
TTACTGAAAG CACAGCAACT AAAACAAATG CTTACTACAG TTCCTACAGG AAAAGAAGGA
ATCGATGGAT ATGGTCTTGG AATCTATGAA ACTAAGCTTC AAAACGATGT CTCGATATGG
GGACACACAG GTGGCATTCT AGGGTTTACT ACTCTTGTTG GAGGTAAACT TGGAGGCAAG
CATACGTTGG TCGTCAATTG GAATAGTTTG GGTAGAGCTG ACAGTCCTAA TCCTTTTAAA
AATATTTTAC TTGCTGAATT TGGTAAGTAG
|
|---|
| Protein sequence | MKTRSQITFA SLALLIAGSS LLYTTPASIV KAEPTQNVSS SLQTSTQRDR TSVKQAMRDT
LQLGYPGILA KTSEGGKTWS YAAGVADLSS KQPMKTDFRF RIGSVTKTFT ATVVLQLVGE
NRLNLDDYIE KWLPGVIQGN GYDGNQITIR QILNHTSGIA EYSRSKDADF TDTKKSYTAE
ELVKMGISLP PDFAPGKGWS YSNTGYVLLG ILIEKVTGNS YAEEIESRII EPLELSNTFL
PGNSSVIPGT KHARGYVQPD GVSELKDVTY YNPSAGSSAG DMISTADDLN KFFSYLLGGK
LLKAQQLKQM LTTVPTGKEG IDGYGLGIYE TKLQNDVSIW GHTGGILGFT TLVGGKLGGK
HTLVVNWNSL GRADSPNPFK NILLAEFGK
|
|---|
| |