Gene BcerKBAB4_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_1954 
Symbol 
ID5842167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp2010399 
End bp2011568 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content37% 
IMG OID641377135 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001644813 
Protein GI163939929 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000478043 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAG ATATGCAACC ATTTTTACAA CAAGCTTGGG AAAAGGCTGG TTTTAAAGAA 
TTTACTGAAA TTCAAAAACA AGCGATTCCA ACTATTTTAG AAGGACAAGA CGTTATTGCT
GAATCTCCAA CTGGAACAGG AAAAACATTA GCGTACTTAT TACCACTTTT ACATAAAATT
AATCCTGAAG TTAAACAACC TCAAGTTGTA ATTTTAGCGC CAACTCGTGA ACTTGTTATG
CAAATTCATG AAGAGGTTCA AAAGTTTACA GCAGGAACGG ATATTTCAGG TGCGTCTTTA
ATTGGTGGTG CGGATATTAA GCGCCAAGTT GAAAAATTAA AGAAACATCC GAGAGTTATT
GTCGGTTCAC CAGGACGTAT TTTAGAGTTG ATTCGCATGA AAAAATTAAA GATGCATGAA
GTGAAAACGA TTGTATTTGA TGAGTTTGAT CAAATTGTAA AACAAAAGAT GATGGGTGCT
GTACTTGATG TAATTAAATC AACGATGCGC GATCGTCAAT TAGTATTCTG CTCGGCGACA
ATAACAAAAG CTGCAGAAGA TGCGGCACGT GATTTGACAG TTGAACCACA ATTAGTACGT
GTAACACGTT CAGAGGCACA GAGCCTAGTT GAACATACGT ATATCGTTTG TGAGCGTCGT
GAAAAAAATG ATTATATTAG AAGAGTTATG CATATGGGAA ATGTAAAAGC AGTTGCCTTC
TTAAATGATC CATTCCGTTT AGATGAAATT ACTCAAAAAC TGAAGTTCCG TAAAATGAAA
GCAGCAGCAC TTCATGCAGA GGCAAGCAAA CAAGAGCGTG AAGTAACGAT GCGCGCGTTC
CGTAGCGGGA AATTAGAAAT ATTACTTGCT ACTGATATTG CAGCACGTGG ATTAGATATC
GATGATTTAA CACACGTAAT CCACTTAGAG TTACCAGACA CAGTAGACCA ATATATTCAC
CGCTCAGGAC GTACTGGACG TATGGGCAAA GAAGGAACAG TTGTTTCTCT TGTAACAGAA
CAAGAAGAGC GTAAATTACT TCAATTTGCG AAAAAATTAG GTATCGTGTT TACGAAACAA
GAAATGTTCA AAGGAACATT TGTAGAATCG AAACCACCAG CACCAAAGAA AAAGAAACCA
GCTTTTACTG GTAAGAAAAA GCCTAGATAA
 
Protein sequence
MIKDMQPFLQ QAWEKAGFKE FTEIQKQAIP TILEGQDVIA ESPTGTGKTL AYLLPLLHKI 
NPEVKQPQVV ILAPTRELVM QIHEEVQKFT AGTDISGASL IGGADIKRQV EKLKKHPRVI
VGSPGRILEL IRMKKLKMHE VKTIVFDEFD QIVKQKMMGA VLDVIKSTMR DRQLVFCSAT
ITKAAEDAAR DLTVEPQLVR VTRSEAQSLV EHTYIVCERR EKNDYIRRVM HMGNVKAVAF
LNDPFRLDEI TQKLKFRKMK AAALHAEASK QEREVTMRAF RSGKLEILLA TDIAARGLDI
DDLTHVIHLE LPDTVDQYIH RSGRTGRMGK EGTVVSLVTE QEERKLLQFA KKLGIVFTKQ
EMFKGTFVES KPPAPKKKKP AFTGKKKPR