Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_0554 |
Symbol | |
ID | 5840744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 643685 |
End bp | 644341 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641375745 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001643448 |
Protein GI | 163938564 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCTGATA TTTCTATATT AACGAATAAC ATTGATATGT ATTTAGAAGG ATTTAAATAT ACGGTTATGT CTAGTGTAGT TGCGCTAATA GGAAGTTTTG TTTTAGGAAT TGTTATGGCA GTGATGCGAA TTTCACCTAT TCGTATTTTG AATTGGATTG GCTCTGCCTA TGTAGAGTTT GTTAGAAATA TTCCACTCGT ATTAATTGCA TTCATTTTCT ATTTTGCTTT GCCTGTAATA GGAATTACTT TCAACGGTTT TGTAGCAGGG ACAGTTGCGC TTACAGTTTA TACAGCGGCT TTTATTGCGG AAGTAATTCG TGCTGGTATT TTATCAGTCG CGAAAGGTCA AATGGAAGCA GCACGTTCTT CAGGATTAAC TTATACGCAA GCGATGTATC ATGTCGTCTT ACCTCAAGCG ATGAAAATCG TCATTCCTCC TCTAGGAAAT CAATTTCTCA ATTTAGTAAA AAACTCTTCA ATACTCGGAA TTATTGCTGG AACGGATTTA ATGTATCAAG GAGACTTAAT TTCAACGAAG ACGTTCGTTA CGTTTGATGT ATATATATTT GTCGGGATGT TTTATTTAGT ATTAACAATA CCGCTAAGTA TGCTAGTGCG TTATTTAGAA AAACGCTTGG CAAAGGAGGC GGTATAA
|
Protein sequence | MPDISILTNN IDMYLEGFKY TVMSSVVALI GSFVLGIVMA VMRISPIRIL NWIGSAYVEF VRNIPLVLIA FIFYFALPVI GITFNGFVAG TVALTVYTAA FIAEVIRAGI LSVAKGQMEA ARSSGLTYTQ AMYHVVLPQA MKIVIPPLGN QFLNLVKNSS ILGIIAGTDL MYQGDLISTK TFVTFDVYIF VGMFYLVLTI PLSMLVRYLE KRLAKEAV
|
| |