Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_0208 |
Symbol | |
ID | 5840232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 220019 |
End bp | 221746 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641375349 |
Product | extracellular solute-binding protein |
Protein accession | YP_001643104 |
Protein GI | 163938220 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAA AGACAAAAAA ATGGGCTGGT GTATTTTCGG TATTACTGAG TAGTTCGCTT GTGTTATCTG CTTGTGGGGG ACAGGAGGAT ACGGCTTCTA CAGAACCAGT AAAACAGCAA GATTTAAAAA ATATAAAAGT TGAAAATATT GCTGCGACAG ATAAGACGAA AGTACCAGAT AAAGCGAAGA ATAGAAAAGA TACGTTAGTA GTTGGCATTA GTAAACCAGG CGGCGTATTT TTACCATATT TCCAACAAAA TGGTTGGGAT GGAAACGTCA CTTCAGTTAT TTTTGCATCC CTTGTATCTA CAGATAAACA AGGAAAACCA ACTCCAGAAT TAGCTGAGAA GTGGGATATT TCCTCTGATC AGTTAACATA TACATTCCAT TTACGTAAAG ATTTGAAATT TAGCGATGGT TCACCATTAA CAGCAGATGA TGTAGCGTTC ACATTGACGC TTTTACACGA TAAGGCATAT GAGGGTGACA AAGACATTTC TCAATATGCT GTTAAAGGTG GTAAAGAATA TAAAGAAGGA AAAGCAACTT CTATTGAAGG AATTCAAGTT GTTGATCCAC AGACAATTAA AATTACAACT GAAAAAGTTA ATTCACAGGC ACTAACAGCC TTAGGTGGAG AGGTATTATC AAAAGCTTAT TATGGAAAAG ATTACAAACA AAATACAAGC TTAGATTACT TAAAAGCGTT ATATGAAAAA CCGATAGCTG CGGGTCCATA TAAATTTGAA AAGTATATCC CAGGGCAAGA AGTGCGATTT GTAGCAAATG AAAATTATTA TGCGGGTAAA CCAAAAATTC CAAACTTCAT TTATAAAATT ACTTCTGGTG ATACGAAGCT TCAATTATTC CAAACAGGTG AGGTTGACTA CACTGGCCTA GGTACTGGTG ACGAAGTTCT TGAACAGGCT AAGGCTTTAG AATTTGCAAA TATCCAAATC GAAACAGCAG CGTCATTTAG CTATATTTAT ATGAATAATA ATAAGCCGTA CTTAAAGGAT AAAAAGGTTC GTCAAGCACT TATTTACGGA TTAGATCGTA AAAAATATGT TGATACAGCA TTGAAAGGAT ACGGTACGGT AGCTAATGTA CCAATTCATC CAACTTCTTG GGCTTATACG GAAGAAGGAG TTAATAAATA TGAATACGAC AAAGAAAAAG CGAAAAAATT ATTAGATGAA GCAGGATGGA AAGTTGGTTC GGATGGAATT CGTGAAAAAG ATGGTCAAAA ATTAAAGCTT TCTTATTTCG GCCCAAGTTC GGCTAAAGAT AGCGATTTAT TAATTCCGAT TGCAAAAGAG AATTATAAAG AAATAGGTGT AGAATTTAAC CCTGAATTTA TGGACTTTAA TACTATGCTT TCGAAGGTAA ACAAAGGTGA TTATGATTTA GCTTCTGTTT CGACACCAAT TACAAGTGAT CCGAGTGAAA CAGCTGGTGA ATATTTGTCG GGTGTCAATG AGAAGAGTCT TGGTTATAAA AATGCAAAAG TAGATGAGTT AATTCAAAAG GGTATTGAAA CGGTAGATAT TGAAAAACGT AAACCAATCT ATAAAGAACT GTATAAAGAA TTAAGTGATG ATCCACCAGT AATTCTATTA AACTATCGTA GAACAATTAC TGGTTATAAC GGGAATATAA AAGGAATTGA CCCTGAAAAA TACAATAGTA TTAGTGCAAA CTTACCAGCT CTATCTATCG AAAAATAA
|
Protein sequence | MKKKTKKWAG VFSVLLSSSL VLSACGGQED TASTEPVKQQ DLKNIKVENI AATDKTKVPD KAKNRKDTLV VGISKPGGVF LPYFQQNGWD GNVTSVIFAS LVSTDKQGKP TPELAEKWDI SSDQLTYTFH LRKDLKFSDG SPLTADDVAF TLTLLHDKAY EGDKDISQYA VKGGKEYKEG KATSIEGIQV VDPQTIKITT EKVNSQALTA LGGEVLSKAY YGKDYKQNTS LDYLKALYEK PIAAGPYKFE KYIPGQEVRF VANENYYAGK PKIPNFIYKI TSGDTKLQLF QTGEVDYTGL GTGDEVLEQA KALEFANIQI ETAASFSYIY MNNNKPYLKD KKVRQALIYG LDRKKYVDTA LKGYGTVANV PIHPTSWAYT EEGVNKYEYD KEKAKKLLDE AGWKVGSDGI REKDGQKLKL SYFGPSSAKD SDLLIPIAKE NYKEIGVEFN PEFMDFNTML SKVNKGDYDL ASVSTPITSD PSETAGEYLS GVNEKSLGYK NAKVDELIQK GIETVDIEKR KPIYKELYKE LSDDPPVILL NYRRTITGYN GNIKGIDPEK YNSISANLPA LSIEK
|
| |