Gene Bcer98_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3580 
Symbol 
ID5346678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3640498 
End bp3641304 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content35% 
IMG OID640841078 
ProductNLPA lipoprotein 
Protein accessionYP_001376776 
Protein GI152977259 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen 
TIGRFAM ID[TIGR00363] lipoprotein, YaeC family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.196099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TATTACTTTC AGCACTTATT ACGACATCAA TTTTTGGATT AACAGCTTGC 
GGTGGGAAAA GTGAAGATAA GCTTGTTGTC GGTGCTTCTA ATGTACCGCA CGCTGAGATT
TTAGAGAAGG CAAAACCATT GCTTGAGAAA AAGGGCGTTG TGTTAAAAAT TGAAAAATTT
CAGGACTATG TATTACCGAA TAAATCATTA GCAGATAAAG AATTAGATGC AAACTATTTC
CAGCATATTC CGTATTTAGA GAAAGAAATA AAGGATAAAG GGTATAAGTT TGAAATAGCA
GGCAAAATTC ATTTAGAACC GATTGGAGTA TACTCTCAAA AATATAAAAG CTTAAAAGAG
CTTCCAGATG GAGCGACAGT AATTATGAGT AACTCTGTGG CTGATCATGG CCGCGGATTA
GCAATCTTAC AAAAAGAGGG CATTTTAAAA ATTAAAGATG GTGTAGATCC TGTGAAAGCA
ACAACAAAAG ATATTGCGGA AAATCCAAAG AACTTGAAGT TTAAAACAGA TATCGAACCA
GGTCTATTGC CACAAGTGTA TAACAACAAG GAAGGCGATG CGGTTTTAAT TAACTCAAAC
TATGCAATTG ATGCAAAATT AGATCCAGGA AAAGATGCAA TTGCGATTGA AAGTAATGAT
TCTCCATATA CAAACGTAGT GGCAGTTCGT AAAGGGGATA AAGATAAAAA AGAGATTAAA
GCGCTTGTAG AAGTATTGCA TTCGAAAGAA ATTGAAGATT TCATCAAGAA AGAATATAAA
GGGGCGGTTG TTCCTGTAAA AGAATAA
 
Protein sequence
MKKLLLSALI TTSIFGLTAC GGKSEDKLVV GASNVPHAEI LEKAKPLLEK KGVVLKIEKF 
QDYVLPNKSL ADKELDANYF QHIPYLEKEI KDKGYKFEIA GKIHLEPIGV YSQKYKSLKE
LPDGATVIMS NSVADHGRGL AILQKEGILK IKDGVDPVKA TTKDIAENPK NLKFKTDIEP
GLLPQVYNNK EGDAVLINSN YAIDAKLDPG KDAIAIESND SPYTNVVAVR KGDKDKKEIK
ALVEVLHSKE IEDFIKKEYK GAVVPVKE