Gene Bcer98_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3369 
Symbol 
ID5347540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp3437715 
End bp3438443 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content34% 
IMG OID640840856 
Productpseudouridine synthase 
Protein accessionYP_001376579 
Protein GI152977062 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAG ATAAATTATT AGCAAATATG GGATATGGAA GTAGAAAAGA AGTAAAAAAA 
TTATTGAAAG ACGGCGTTGT AAGGATTGAT GGAAAACCAG TCAAAGATGC AAAGTTTCAT
GTGAATATAG AAAAGCAAGA AGTAACAATT TATGGTGAAG TTGTTGAATA TAAAGAGTTT
GTTTATTTAA TGATGCATAA ACCACAAGGA GTCATTTCTG CAACAGAAGA CGATCATCAT
GAAACAGTTG TTGATCTACT GGAATTTGAA GATGCAATCT TTAATCCATT TCCTGTTGGA
AGACTTGATA TTGATACAGA AGGTTTGCTG CTATTAACAA ATGACGGAAA GTTGACGCAT
CAGCTTCTAT CACCGAAAAA GCATGTGCCA AAAAAATATT ATGCACATAT AGAAGGTGTA
GTTACAGAAA AAGATGTGGA AGATTTTGCA AAAGGTGTTG TTCTAGATGA TGGCTATGAA
ACAAAACCTG GCGAACTGAC CATTTTAAAC AGTGATGATA TATCTGAAAT TGAGCTTGTA
ATTACAGAAG GTAAATTCCA TCAGGTAAAG CGTATGTTTG AAGCTGTTGG GAAAAAAGTC
GTCTACTTGA AGAGAGTAGA GATGGGACCT TTAACGTTAG ATGAGGAATT AGAACTTGGG
CAATACCGTG AGTTGACAGA TGAAGAGGTT GAAATGTTAA AAATGTATCA AGTGCAACAC
GAGAATTAA
 
Protein sequence
MRLDKLLANM GYGSRKEVKK LLKDGVVRID GKPVKDAKFH VNIEKQEVTI YGEVVEYKEF 
VYLMMHKPQG VISATEDDHH ETVVDLLEFE DAIFNPFPVG RLDIDTEGLL LLTNDGKLTH
QLLSPKKHVP KKYYAHIEGV VTEKDVEDFA KGVVLDDGYE TKPGELTILN SDDISEIELV
ITEGKFHQVK RMFEAVGKKV VYLKRVEMGP LTLDEELELG QYRELTDEEV EMLKMYQVQH
EN