Gene Bcer98_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3107 
Symbol 
ID5343850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand- 
Start bp3148532 
End bp3149191 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content37% 
IMG OID640840601 
ProductTPR repeat-containing protein 
Protein accessionYP_001376326 
Protein GI152976809 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATA AGCTTGAAAT AGGCATTCGA TATATGCAAG AAGGAAATTG GGAAGAAGCA 
GCCAAAAACT TTACAGAGGC AATTGAAGAA AATCCAAAAG ATGCTCTAGG ATATATTAAC 
TTTGCCAATT TACTAGATGT GTTAGGCGAT AGCGAGCGTG CAATTTTATT TTATAAACGT 
GCATTAGAGT TAGATGAAAA ATCAGCTACT GCCTATTATG GACTTGGGAA CATATATTAT 
AGTCGAGAGC AATTCCAAGA AGCAAAAGCA ATGTTTGAAC AGGCAATGCA AGGTGGTTTG 
CAATCAGCTG ATATCGTATT TATGCTTGGG ATTACACATG TGCAGCTTGG AAATGATCGC 
CTTGCGTTGC CATTTCTACA AAGAGCTGCG GAATTGGATG AAATGGATGT CGAGGCAGCA 
TTTCAATGCG GATTATGCCT TGCGCGATTA GAGCATGTTA AAGAGGCGAA ACCGTATTTT 
GAAAAGGTAT TACAAATGGA TAAAGAACAT GCTGATGCGT ATTATAATTT AGGTGTTGCT 
TACGTGTTTG AAGAGAATAA GGAAAAGGCG CTTGCTTTAT TTAAAAAAGC AACGAAAATC 
CAGCCAGATC ACTTTTTAGC TGGGAATGGT ATTCGTTTGT TAGAACAAGA AAGTAAATAA
 
Protein sequence
MSNKLEIGIR YMQEGNWEEA AKNFTEAIEE NPKDALGYIN FANLLDVLGD SERAILFYKR 
ALELDEKSAT AYYGLGNIYY SREQFQEAKA MFEQAMQGGL QSADIVFMLG ITHVQLGNDR 
LALPFLQRAA ELDEMDVEAA FQCGLCLARL EHVKEAKPYF EKVLQMDKEH ADAYYNLGVA 
YVFEENKEKA LALFKKATKI QPDHFLAGNG IRLLEQESK