| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1805 |
|---|
| Symbol | |
|---|
| ID | 5345539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | + |
|---|
| Start bp | 1922292 |
|---|
| End bp | 1923203 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640839373 |
|---|
| Product | hydroxymethylglutaryl-CoA lyase |
|---|
| Protein accession | YP_001375099 |
|---|
| Protein GI | 152975582 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0421584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAATTAC CTAATTTTGC TGTCATTAAG GAAGTTGGGC CAAGAGATGG CCTACAAAAT
GAAAAAAAGA TCATTGGCAC AAAAGATAAA GTAACATGGA TTCAATTACT AACAGAAGCA
GGATTATCAT ACATTGAAGT TTCCTCTTTT GTTCACCCAA AGTGGGTTCC TGCTTTAGCT
GATGCAAGTG ATGTATTTAG AGAGCTAAAG AGGGAATCAA ATGTGACATA TGCTGCGCTT
GTTCCAAATC AAAATGGTTT GGAACGAGCT CTTTTGCAAG ATGTTGATGA GGTGAATGTC
TTTTTATCAG CAAGTGAATC TCATAATAAA AGTAATATTA ATAAATCTAT GAAAGAAGCA
GTAGCAGTCA TAAAAGATAT TACGAAAAAA GCTGAGTTTG CTGGTAAAAA AGTGAGAGGG
TATGTGTCTA CTGTATTTGG TTGCCCATAT GAAGGAAATG TAAGTATAGA AGCAATAGAT
GAATTATGCA ACCAACTCTT TTCATATGGT ATTTATGAAA TCTCGCTAGG AGATACAATC
GGTGTAGCGA ATCCCCTTCA AGTAGAACAA GTATTAGAGC ATTTATTAAA AAAGTATGAT
GCTTCTCAGT TTGCTATGCA TTTTCATAAT ACGTATGGAA TGGCACTTGC AAATGTTGTG
AAATCTTTAG AATACGGAAT TACAACCTTT GATAGTTCGT GCGGTGGTTT AGGTGGCTGC
CCTTATGCAC CAGGAGCTTC AGGAAATGTT GCAACAGATG ACCTCGTGCA TATGCTTCAT
AAGTTAGGTG TACAAACAAA TATAAATGAA GAAAAGTTAT GGAAAGCTAG TCAATTCATT
CAAAATAAAC TAAATATTCA ATTACCTAGT CATGTGTATA AAGCGCTTCA ACATAAAACG
ATAAGTAGGT GA
|
|---|
| Protein sequence | MKLPNFAVIK EVGPRDGLQN EKKIIGTKDK VTWIQLLTEA GLSYIEVSSF VHPKWVPALA
DASDVFRELK RESNVTYAAL VPNQNGLERA LLQDVDEVNV FLSASESHNK SNINKSMKEA
VAVIKDITKK AEFAGKKVRG YVSTVFGCPY EGNVSIEAID ELCNQLFSYG IYEISLGDTI
GVANPLQVEQ VLEHLLKKYD ASQFAMHFHN TYGMALANVV KSLEYGITTF DSSCGGLGGC
PYAPGASGNV ATDDLVHMLH KLGVQTNINE EKLWKASQFI QNKLNIQLPS HVYKALQHKT
ISR
|
|---|
| |