Gene Bcep18194_C6957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_C6957 
Symbol 
ID3734360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007509 
Strand
Start bp516296 
End bp516934 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID637760660 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_366647 
Protein GI78060072 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.507189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.560264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGC ACGCCTCCGT CACCGGCATT GCCGCGCCGC TGCCGCTGAA CAATCTCGAT 
ACCGACCAGA TCATGCCGAA GCAGTTTCTG CTCGGCATCG ACAAGTCGGG GCTCGCGCGC
GGCGTGCTGT ACGACCTCCG TCACGACGGC TCGGGCGCGC GTCGGCCGGA TTTCGTATTG
AACCGCCCGG AGTATCAAGA GGCGCGCATC CTGGTGGCTG GCGCCAATTT CGGCTGCGGC
TCCAGCCGCG AACACGCGGT GTGGGGCTTG CAGCAGGCGG GCTTCGACGC GGTGATCGCG
CCGAGCTTCG GCGAGATCTT CTACTTCAAC GCGCTGAACA ACCGGCTGTT GCTGGTGATG
CTCGATCCGG CCGTCGTGTC GACGCTCGTC GAACAGGCGC GCAACCCGGC TACGTGCACG
TTGACGATCG ACGTGCTGCG CCAGGTCGTC AGGACAGCAG AGGGAAGCGA GTACCCGTTC
GACCTGCCCG AGCGGCAGAA GCGCATGTTC GTCGAAGGGC GGGACATGAT CGGCATGACG
CTCGCCGATC GCGATGCGAT CGATGCGTTC GAGGCGCGCC ATCACGCGGC CAGCCCGTGG
ATGAAGATCG ATTTGCCGAA GCAGCAGCGC GCGGTGTGA
 
Protein sequence
MREHASVTGI AAPLPLNNLD TDQIMPKQFL LGIDKSGLAR GVLYDLRHDG SGARRPDFVL 
NRPEYQEARI LVAGANFGCG SSREHAVWGL QQAGFDAVIA PSFGEIFYFN ALNNRLLLVM
LDPAVVSTLV EQARNPATCT LTIDVLRQVV RTAEGSEYPF DLPERQKRMF VEGRDMIGMT
LADRDAIDAF EARHHAASPW MKIDLPKQQR AV