| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C6608 |
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| Symbol | |
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| ID | 3733886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007509 |
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| Strand | + |
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| Start bp | 106275 |
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| End bp | 109466 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637760310 |
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| Product | hydrophobe/amphiphile efflux-1 pump, HAE1 |
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| Protein accession | YP_366302 |
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| Protein GI | 78059727 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.164679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TCTTTATCGA TCGCCCGATC TTTGCGTGGG TGATCGCGAT CGTGCTGATG
CTGGCCGGCG TCGCATCGAT CTTCAAGATG CCGATCGCGC AGTATCCGAC GATCGCACCG
CCGACGATCC AGATCCAGGC GAACTATCCG GGCGCTTCCG CGAAGACGGT GGAAGACACG
GTGACGCAGG TGATCGAGCA GCAGATGAGC GGTCTCGACA ACTTCCTGTA CATGTCGTCG
ACCAGCGATG ACTCGGGTAA CGCGACGATC ACGCTGACCT TCTCGCCGGG TACGAATCCG
GACGTCGCGC AGGTGCAGGT GCAGAACAAG CTGTCGCTTG CGACGCCGAA CCTGCCGCAG
GTCGTGCAGC AGCTCGGCAT GCAGGTCACG AAGTCGAGCA GCAACTGGCT GATGTGGTTC
GCGTTCAATT CCGACGACGG CAGCATGTCG AAGGAGGACC TGACGAACTA TGTGGCGTCG
CACGTGCTTG ATCCGCTCAG CCGCGTGAAC GGCGTCGGCC AGACGCTGCT GCTCGGTTCG
CAGTTTTCGA TGCGCATCTG GCTCGACCCG GTCAAGCTGA CCAACTACAG CCTCACGCCG
ACCGACGTGT CGGCCGCGAT CACGCAGCAG AATGTGCAGA TCGCGGGCGG CCAGATCGGC
GGCACGCCGG CGAAGCCGGG CACGATGCTG CAGGCGACGA TCACCGAATC GACGCTGCTG
CGCACGCCCG AGCAGTTCGG CAACATCCTG CTGAAGGTCA ACCAGGACGG TTCGCAGGTT
CGCCTGAAGG ACGTCGGCCG CGCGGCGCTC GGCTCCGAGA ACTACACGTT CGACACGAAG
TACATGGGGC AGCCGACGGC TGGCCTCGGC ATCCAGCTCG CGACCGGCGC GAACGCGCTG
GCGACCGCGA CCGCGCTGCG GGCGAAGATC GACGAACTGT CGAAGTATTT CCCGCACGGT
CTCGTCGTCC ACTATCCGTA CGACACGACG CCGTTCGTGC GCCTGTCGAT CGAGGAAGTG
GTCAAGACGC TGCTCGAAGG GATCGTGCTT GTGTTCCTCG TGATGTACCT GTTCCTGCAG
AACCTGCGGG CAACGATCAT CCCGACGATC GCGGTGCCGG TCGTGCTGCT CGGTACGTTC
GCGATCATGG GCGTCGCCGG CTTCTCGATC AACACGCTGT CGATGTTCGG CCTCGTGCTT
GCCATCGGCC TGCTGGTCGA CGATGCGATC GTGGTCGTGG AGAACGTCGA GCGCGTGATG
GCCGAGGAGG GACTGTCACC GAAGGAGGCG ACCCGCAAGG CGATGGGCCA GATCACCGGC
GCACTCGTCG GCGTGGCGCT CGTGTTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCGGGT
GGCTCGGTCG GCGCGATCTA TCGTCAGTTC TCGCTGACGA TCGTGTCGGC AATGGTGCTG
TCGGTGCTCG TCGCGTTGAT TCTGACGCCG GCACTGTGCG CGACGATCCT CAAGCCGATC
CCGCAAGGGC ATCACGAGGA GAAGAAGGGC TTCTTCGGCT GGTTCAACCG CACGTTCGAC
CGCAGCCGCG ATCGCTATAC GGGGGGCGTG AATCACGTGA TCCGTCGCTC GGGACGCTGG
CTGGTGATCT ACCTGGCCGT GTTCATCGCG GTCGGCGTGA TGTTCGTGCG CCTGCCGAAG
TCGTTCCTGC CGGATGAAGA CCAGGGCTAC ATGTTCATGA TCGTGCAGAC GCCGTCCGGC
TCCACGCAGG AAACGACCGG CAAGACGCTC GACAACATCA ACACGTACCT GACCACCACC
GAGAAGGACG TGGTCGACTC GGTGTTCACG GTCAATGGCT TCAGCTTTGC GGGCCGCGGC
CAGAACGCCG GTCTCGTGTT CGTGAAGCTG AAACCGTACG AGCATCGCCA GCGTTCGGAC
CAGAAGGTGC AGGCGCTGAT CGGTCGGACC TTCGCGCACT ACTCGCAGTA CAAGGATGCG
ATGGTGATCC CGTTCAACCC GCCGTCGATT CCCGAACTCG GGACGGCTGC CGGCTTCGAC
TTCGAGCTGA CGGACAACGC CGGTCTCGGC CACGAAGCGC TGATGGCCGC GCGCGGGCAG
TTGCTCGGGA TGGCCGCGAA GGATCCCGCG CTGGCACTCG TGCGCCCGAA CGGCCTGAAC
GATACGCCGC AGTACAAGGT CGACATCGAT CGCGAGAAGG CGAACGCGCT CGGTGTGACG
GCTGCTGCGA TCGACCAGAC GTTCTCGATC GCGTGGGCGT CGCAGTATGT GAACAACTTC
CTCGATATGG ATGGCCGGAT CAAGAAGGTG TACGTGCAGT CGGACGCGCC GTTCCGGATG
ACGCCGGAAG ACATGAACAT CTGGTACGTG CGCAATAGCG CGGGCGGCAT GGTGCCGTTC
AGTGCGTTCT CGACCGGCCA CTGGAGCTAC GGTTCGCCGA AGCTCGAGCG CTACAACGGC
GTGTCGTCGA TCGAGATCCA GGGGCAGGCC GCGGAAGGCA AGTCGACCGG CCAGGCGATG
GCTGCAATGG AAGCGCTCGC GAGCAAGCTG CCGGAAGGTA TCGGCTACTC GTGGACGGGT
CTGTCGTTCC AGGAAATACA GTCCGGCTCG CAGGCGCCGA TCCTGTACGC GATCTCGATC
CTCGTCGTGT TCCTGTGTCT CGCGGCGCTG TATGAAAGCT GGTCGATTCC GTTCTCGGTG
ATCATGGTGG TGCCGCTCGG TGTGGTCGGC GCGCTGCTCG CGACGATGCT GCGTGGGCTC
GAGAACGACG TGTTCTTCCA GGTCGGCCTG CTGACCACCG TGGGCCTGTC CGCGAAGAAC
GCGATCCTGA TCGTCGAGTT CGCACGCGAA TTGCAGACGA GAGAGAACAT GGGGCCGGTG
CGCGCGGCGA TCGAGGCGGC GCGTCTGCGG CTGCGTCCGA TCCTGATGAC GTCGCTCGCG
TTCATGCTCG GCGTGCTGCC GCTTGCGATC AGCAACGGCG CGGGTTCGGC CAGCCAGCAT
GCAATCGGCA CGGGTGTGAT CGGCGGGATG ATCACGGCGA CGTTCCTCGC GATTTTCATG
ATCCCGATGT TCTTCGTGCG GGTTCGTGCG ATCTTCAGCG GCGAGACGGA AAACGTCGAC
GACGCATGGC GTCTCGTGCA GGGCGACCTG CAGCGCGGTC ACGACGACGC ACACGATTCG
AAGGGGCAGT AA
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| Protein sequence | MAKFFIDRPI FAWVIAIVLM LAGVASIFKM PIAQYPTIAP PTIQIQANYP GASAKTVEDT
VTQVIEQQMS GLDNFLYMSS TSDDSGNATI TLTFSPGTNP DVAQVQVQNK LSLATPNLPQ
VVQQLGMQVT KSSSNWLMWF AFNSDDGSMS KEDLTNYVAS HVLDPLSRVN GVGQTLLLGS
QFSMRIWLDP VKLTNYSLTP TDVSAAITQQ NVQIAGGQIG GTPAKPGTML QATITESTLL
RTPEQFGNIL LKVNQDGSQV RLKDVGRAAL GSENYTFDTK YMGQPTAGLG IQLATGANAL
ATATALRAKI DELSKYFPHG LVVHYPYDTT PFVRLSIEEV VKTLLEGIVL VFLVMYLFLQ
NLRATIIPTI AVPVVLLGTF AIMGVAGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM
AEEGLSPKEA TRKAMGQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVSAMVL
SVLVALILTP ALCATILKPI PQGHHEEKKG FFGWFNRTFD RSRDRYTGGV NHVIRRSGRW
LVIYLAVFIA VGVMFVRLPK SFLPDEDQGY MFMIVQTPSG STQETTGKTL DNINTYLTTT
EKDVVDSVFT VNGFSFAGRG QNAGLVFVKL KPYEHRQRSD QKVQALIGRT FAHYSQYKDA
MVIPFNPPSI PELGTAAGFD FELTDNAGLG HEALMAARGQ LLGMAAKDPA LALVRPNGLN
DTPQYKVDID REKANALGVT AAAIDQTFSI AWASQYVNNF LDMDGRIKKV YVQSDAPFRM
TPEDMNIWYV RNSAGGMVPF SAFSTGHWSY GSPKLERYNG VSSIEIQGQA AEGKSTGQAM
AAMEALASKL PEGIGYSWTG LSFQEIQSGS QAPILYAISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVVG ALLATMLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQTRENMGPV
RAAIEAARLR LRPILMTSLA FMLGVLPLAI SNGAGSASQH AIGTGVIGGM ITATFLAIFM
IPMFFVRVRA IFSGETENVD DAWRLVQGDL QRGHDDAHDS KGQ
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