| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C6549 |
|---|
| Symbol | |
|---|
| ID | 3734136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007509 |
|---|
| Strand | - |
|---|
| Start bp | 33313 |
|---|
| End bp | 34932 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637760252 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_366244 |
|---|
| Protein GI | 78059669 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.374556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATA CCGATACGCA AAAGGCCGAC ATCGTCGTCG TCGGGTCGGG TGTCGCAGGC
GCGATCGTTG CACACCAGCT CGCGATGGCG GGCAAGTCCG TGATCCTGCT GGAAGCCGGC
CCGCGCATGC CGCGCTGGGA AATCGTCGAA CGCTTTCGCA ACCAGGTCGA CAAGACCGAT
TTCATGGCGC CGTACCCGTC GAGCGCGTGG GCGCCGCATC CGGAGTACGG CCCGCCGAAC
GACTACCTGA TCCTGAAGGG CGAGCACAAG TTCAACTCGC AGTACATCCG CGCGGTGGGC
GGCACGACGT GGCACTGGGC CGCGTCGGCA TGGCGCTTCA TCCCGAACGA CTTCAAGATG
AAGACGGTGT ACGGCGTCGG CCGCGACTGG CCGATCCAGT ACGACGATAT CGAGCATTAC
TACCAGCGCG CCGAAGAGGA ACTCGGCGTG TGGGGCCCGG GCCCCGAGGA AGACCTGTAC
TCGCCGCGCA AGGAGCCGTA CCCGATGCCG CCGCTGCCGT TGTCGTTCAA CGAGCAGACG
ATCAAGAGCG CGCTCAACGG CTATGACCCG AAGTTCCACG TGGTGACCGA GCCTGTGGCG
CGCAACAGCC GCCCGTACGA CGGCCGGCCG ACTTGTTGCG GGAACAACAA CTGCATGCCG
ATCTGCCCGA TCGGCGCGAT GTACAACGGC ATCGTGCACG TCGAGAAGGC CGAGCAGGCC
GGCGCGAAGC TGATCGACAG CGCGGTCGTC TACAAGCTCG AGACCGGGCC GGACAAGCGC
ATCACCGCCG CGGTCTACAA GGACAAGACG GGCGCCGACC ACCGCGTCGA AGGCAAGTAC
TTCGTGATCG CCGCGAACGG CATCGAGACG CCGAAGATCC TGCTGATGTC CGCGAACCGC
GATTTCCCGA ACGGTGTCGC GAACAGCTCG GACATGGTCG GCCGCAACCT GATGGACCAC
CCGGGCACCG GCGTGTCGTT CTACGCGAAC GAGAAGCTGT GGCCGGGCCG CGGCCCGCAG
GAGATGACGT CGCTGATCGG TTTCCGCGAC GGCCCGTTCC GCGCGAACGA AGCCGCGAAG
AAGATCCACC TGTCGAACAT GTCGCGCATC AACCAGGAAA CGCAGAAGAT TTTCAAGGGC
GGCAAGCTGA TGAAGCCCGA GGAGCTCGAC GCGCAGATCC GCGACCGTTC CGCGCGCTTC
GTGCAGTTCG ACTGCTTCCA CGAAATCCTG CCGCAACCCG AGAACCGCAT TGTGCCGAGC
AAGACGGCCA CCGACGCGGT CGGCATTCCG CGCCCCGAGA TCACGTATGC GATCGACGAT
TACGTGAAGC GCGGCGCCGT GCACACGCGC GAGGTCTACG CGACGGCCGC GAAGGTGCTG
GGCGGCACCG AAGTCGTCTT CAACGACGAG TTCGCGCCGA ACAATCACAT CACGGGCGCG
ACGATCATGG GCGCGGATGC ACGCGACTCG GTCGTCGACA AGGACTGCCG CACGTTCGAC
CATCCGAACC TGTTCATCTC GAGCAGCTCG ACGATGCCGA CCGTCGGTAC GGTGAACGTG
ACGCTGACGA TCGCGGCGCT TGCGCTGCGG ATGTCGGACA CGCTGAAGAA GGAAGTCTGA
|
|---|
| Protein sequence | MADTDTQKAD IVVVGSGVAG AIVAHQLAMA GKSVILLEAG PRMPRWEIVE RFRNQVDKTD
FMAPYPSSAW APHPEYGPPN DYLILKGEHK FNSQYIRAVG GTTWHWAASA WRFIPNDFKM
KTVYGVGRDW PIQYDDIEHY YQRAEEELGV WGPGPEEDLY SPRKEPYPMP PLPLSFNEQT
IKSALNGYDP KFHVVTEPVA RNSRPYDGRP TCCGNNNCMP ICPIGAMYNG IVHVEKAEQA
GAKLIDSAVV YKLETGPDKR ITAAVYKDKT GADHRVEGKY FVIAANGIET PKILLMSANR
DFPNGVANSS DMVGRNLMDH PGTGVSFYAN EKLWPGRGPQ EMTSLIGFRD GPFRANEAAK
KIHLSNMSRI NQETQKIFKG GKLMKPEELD AQIRDRSARF VQFDCFHEIL PQPENRIVPS
KTATDAVGIP RPEITYAIDD YVKRGAVHTR EVYATAAKVL GGTEVVFNDE FAPNNHITGA
TIMGADARDS VVDKDCRTFD HPNLFISSSS TMPTVGTVNV TLTIAALALR MSDTLKKEV
|
|---|
| |