| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B2204 |
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| Symbol | |
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| ID | 3753970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 2524791 |
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| End bp | 2527217 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637767051 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_372959 |
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| Protein GI | 78063051 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA CGACAGGCGG AAAGAAAGCA GCAGGCAAGG GCTCGACGGA GCCGACCAAA
AAGGTCACAG CGGCCAAGTC TGCTTCTTCC ACCAGGACAA CGTCTTCAGC CACGTCAGCC
CCTGCAGGAA AGAAAACCGT GGCCGGCACT GCTCAGGCTG CGCCGGCTCC GGCAGCCAGA
ACACGGGCTG CCGCCAGACC CGACTCCGGG CCGGCCAAGC CGGCGGCGAA GCGGGCAAGT
GCGAAAAGCG CAAGGGACAC GACTGCCGCC GCGGACGAAA CGGCAGTACG TACTACTCAT
GCACCCACGG TTCAACCGGC TGTCGTCCAG CAGCCGCGAG TCGATATAGC CGGTACGGCG
AACTCCATGA CCAAAAAGCT GAACGAAGTA TCCGTCGAAG ACGACGCAAA TCAGAGCGAC
GAGCAGCCTG CAGCAGCACC GGCTGCACCG GGCAAATCCA AGGTGCGCGA TCGTCGCGCC
AAGGAAAAGG CGCTACTGAA GGAAGCGTTC GCGACGAGCA CGCCGGGTAC GGCCGAGGAG
CTCGAAGAGC GCCGCGTGAA ACTGCGCGCG CTGATCAAGC TCGGCAAGGA GCGCGGCTTC
CTCACGTACG CCGAAATCAA CGACCACCTG CCGGACAACT TCACCGAGAC CGAAGCCCTT
GAAGGCATCA TCGGTACGTT CAACGACATG GGCGTGGCGG TCTACGAGCA GGCGCCGGAC
GCGGAAACGC TGCTGCTGAA CGACAACGCA CCCGCCGCGT CGTCGGACGA TGAAGTCGAA
GAGGAAGCCG AAGTCGCACT GTCCACCGTC GATTCGGAAT TCGGCCGCAC GACCGATCCG
GTTCGGATGT ACATGCGTGA AATGGGCACG GTCGAGCTGC TCACGCGCGA AGGCGAAATC
GAGATCGCGA AGCGGATCGA GGACGGCCTG CGCCACATGG TGATGGCCAT CTCCGCGTGC
CCGACGACGA TCGCCGACAT CCTCGCGATG GCCGAACGCG TCGCGAACGA AGAGATCCGC
GTCGACGAGC TCGTCGACGG CCTGCTCGAT CCGAATGCTT CGGACTCCGC CGATACCGAC
GGCTTCTCCG CGAAGGAAGC GGAAGCCATC GAGAACGAAG ACGAGGAAGC CGAAGAGGAA
GAGGAAGAGG AAGAAGAGGA AGAGGAGGAA GATGACGGTG CCGCGCAGGC ATCGGCCAAC
GCCGCCCAGC TCGAAGCCCT CAAGCGTGCC TCGCTCGAGA AGTTCTCGCA GATCAGCGAG
TGGTTCGACA AGATGCGCCG CGCGTTCGAA AAGGAAGGCT ACAAGTCGAA GGCCTACCTG
AAGGCGCAGG AAACGATCCA GACCGAACTG ATGACGATCC GCTTCACCGC GCGTACCGTC
GAACGCCTGT GCGACACGCT GCGTGCGCAG GTGGACGAAG TGCGTCAGGT CGAGCGTCAG
ATCCTGCACA TCGTCGTCGA CAAGTGCGGC ATGCCGCGCT CGGAATTCAT CGCACGCTTC
CCGGGCAGCG AGACCGATCT CGACTGGTCC GAAAAGATCA TGGCCGAAGG CCATTCGTAC
AGCGCGGTGC TGTCGCGTAA CGTTCCGGCG ATCCGCGAAC AGCAGCAGCG CCTGCTCGAC
CTGCAGGCGC GTGTCGTGCT GCCGCTGAAG GACCTGAAGG AAACCAACCG CCAGATGGCG
GCCGGCGAAC TGAAGGCGCG TCAGGCGAAG CGCGAAATGA CCGAGGCGAA CCTGCGTCTC
GTGATCTCGA TCGCGAAGAA GTACACGAAC CGCGGCCTGC AGTTCCTCGA CCTGATCCAG
GAAGGCAACA TCGGCCTGAT GAAGGCGGTG GACAAGTTCG AATACCGTCG CGGCTACAAG
TTCTCGACCT ATGCGACGTG GTGGATCCGT CAGGCCATCA CGCGCTCGAT CGCGGACCAG
GCGCGTACGA TCCGTATTCC GGTTCACATG ATCGAGACGA TCAACAAGAT GAACCGCATC
TCGCGGCAGA TCCTGCAGGA AACCGGTCTC GAGCCGGATC CGGCAACGCT CGCCGAGAAG
ATGGAGATGC CGGAAGACAA GATCCGCAAG ATCATGAAGA TCGCGAAGGA GCCGATCTCG
ATGGAAACGC CGATCGGTGA CGACGACGAT TCCCATCTCG GCGACTTCAT CGAGGACACC
AACACGGTCG CGCCGGCGGA TGCCGCGCTG CATGCGAGCA TGCGAGACGT CGTGAAGGAC
GTGCTCGATT CGCTGACGCC GCGCGAGGCG AAGGTGCTGC GGATGCGTTT CGGTATCGAG
ATGAGCACCG ATCACACGCT CGAGGAAGTC GGCAAGCAGT TCGACGTCAC GCGTGAGCGG
ATCCGTCAGA TCGAGGCCAA GGCGCTGCGC AAGCTGCGTC ACCCGAGCCG TTCCGACAAG
CTGAAGTCGT TCCTCGAAGG GAACTGA
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| Protein sequence | MAKTTGGKKA AGKGSTEPTK KVTAAKSASS TRTTSSATSA PAGKKTVAGT AQAAPAPAAR
TRAAARPDSG PAKPAAKRAS AKSARDTTAA ADETAVRTTH APTVQPAVVQ QPRVDIAGTA
NSMTKKLNEV SVEDDANQSD EQPAAAPAAP GKSKVRDRRA KEKALLKEAF ATSTPGTAEE
LEERRVKLRA LIKLGKERGF LTYAEINDHL PDNFTETEAL EGIIGTFNDM GVAVYEQAPD
AETLLLNDNA PAASSDDEVE EEAEVALSTV DSEFGRTTDP VRMYMREMGT VELLTREGEI
EIAKRIEDGL RHMVMAISAC PTTIADILAM AERVANEEIR VDELVDGLLD PNASDSADTD
GFSAKEAEAI ENEDEEAEEE EEEEEEEEEE DDGAAQASAN AAQLEALKRA SLEKFSQISE
WFDKMRRAFE KEGYKSKAYL KAQETIQTEL MTIRFTARTV ERLCDTLRAQ VDEVRQVERQ
ILHIVVDKCG MPRSEFIARF PGSETDLDWS EKIMAEGHSY SAVLSRNVPA IREQQQRLLD
LQARVVLPLK DLKETNRQMA AGELKARQAK REMTEANLRL VISIAKKYTN RGLQFLDLIQ
EGNIGLMKAV DKFEYRRGYK FSTYATWWIR QAITRSIADQ ARTIRIPVHM IETINKMNRI
SRQILQETGL EPDPATLAEK MEMPEDKIRK IMKIAKEPIS METPIGDDDD SHLGDFIEDT
NTVAPADAAL HASMRDVVKD VLDSLTPREA KVLRMRFGIE MSTDHTLEEV GKQFDVTRER
IRQIEAKALR KLRHPSRSDK LKSFLEGN
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