Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1315 |
Symbol | |
ID | 3753080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 1493190 |
End bp | 1494323 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637766164 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_372073 |
Protein GI | 78062165 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.798915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.930034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TTCTTGGCGC CATCGCATTC CTGGTCGTGC TCGTCGGCGT ATGGATCGTG CATCAGGGCG GCCTGTCGAC GCTGATTCCC GCGCATGACG CGGCCCCGGG CTCGACGTCC GCGCAAAGTG GCGACACCGG GCAGTCCGCG CAGACATCGC CGTCGTCCAA CGTACTGCCG GCCGGCTTCA CGCCGCAGGC CAGCACGCTG AAATCGATTG CCGAAAACGG CATCGTGCGG ATCTCCGTGC AGAACCCGAG CGAACCGTTC TTCGGCGAGG ACAAGGGCGC GCCGCACGGC TTCAACGTCG AGTTCGCGCG GCTGCTGTTC GCGGATCCGT CGTTCTCGCA CGGCGGCAAG CCGGTGGCCG TCGATACGCG TCACGAGGTC GACACCTATC CGGGCGTGCC GAAGCAGCTG CTCGATACGG ACGCGAAGGG GAACCACGTG GTCGACGTGG CGATGGACGG GCTGACGTTC CCGGACAACA CGCCGTCGGG TGTGGTCTAT TCGGTGCCGT ACGTCGACGA TTTCGGCTAC TCGCTGATCG TGCGGCAAGG CTCCGCGATC CGCTCGACCG ACGATCTCGC GGGCAAGACG GTCGGCATCC TGAAGGGCGA CCCGGACGTG CGCGCGTTCG TCACGCGCCA GTATCCGAAC GTGAAGTTCG TCGAGGTCGA CGATTCCGAT CCGGCGTTCA TCGCGAAGAG CATCGACGGT CATACGGTCG ACGCGTTCAT CTACGACTAT CCGTTCGCGG TCAGCTCGAT CAAGGACACC GACCTGAAGT TCGCGGTGAC CAAGCTCGAC GGCTCGAACA TCGCGTACAA GATCGGCGTG CGCGCGGACG ACCAGGATCT GCTGATCTAC CTGAATGCCG CGATCGCGAA GCTCAAGCAG TCGCCGCAGT ATCTCGACCT GCTGCGCAAG TACTTCGTCA GCGACCAGGC GGTGACGACT GCGGCCGCGT CGGGCGAACA CACGTATGTG GTGAAGGCGG GCGACACGCT GAACATGATC GCGGCGAGCA AGCTCGGCAG CGGCCAGCGT TATCGCGAGA TTCAACGCCG GAACAACCTC GCCAATCCGA ACCTGATCCT GGCGGGCCAG CACCTCGTGA TTCCGGTGCG GTAA
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Protein sequence | MKKLLGAIAF LVVLVGVWIV HQGGLSTLIP AHDAAPGSTS AQSGDTGQSA QTSPSSNVLP AGFTPQASTL KSIAENGIVR ISVQNPSEPF FGEDKGAPHG FNVEFARLLF ADPSFSHGGK PVAVDTRHEV DTYPGVPKQL LDTDAKGNHV VDVAMDGLTF PDNTPSGVVY SVPYVDDFGY SLIVRQGSAI RSTDDLAGKT VGILKGDPDV RAFVTRQYPN VKFVEVDDSD PAFIAKSIDG HTVDAFIYDY PFAVSSIKDT DLKFAVTKLD GSNIAYKIGV RADDQDLLIY LNAAIAKLKQ SPQYLDLLRK YFVSDQAVTT AAASGEHTYV VKAGDTLNMI AASKLGSGQR YREIQRRNNL ANPNLILAGQ HLVIPVR
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