| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1290 |
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| Symbol | |
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| ID | 3753055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | - |
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| Start bp | 1458327 |
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| End bp | 1460570 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637766139 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_372048 |
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| Protein GI | 78062140 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00589164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC TGGCATTGCC GCGGCCGGCG CGTTTCGCCG GCCGCGTATT CGTGGCCATC
GTGCTGGCGG CGCCGCTCGT CGCGCATGCG CTGCCGAGCT ACGACGAAGT GCGCCGCAAC
TGGCGCAGCT CCGACTGGGT GCTGCTCGCG CGCGACGGCA CGCCGCTGCA GCGCACGCGC
GTCGACCTCA CCGAACGGCG CGGCGACTGG GTGTCGCTTG CCGACGTGTC GCCCGCGTTT
CGCGAGGCGA TCGTCGTGTC GGAAGACAAG CGCTTTTATG AACACAGCGG CGTCGACTGG
CGCGGCATCG CCGGCGCCGC GTGGGGCAAC CTGTGGAACG AGCGCACGCG CGGCGCGTCG
ACCGTCACGA TGCAGCTCGC CGGGCTGCTC AGCGATTCGC CGCGCCGGTC GGGCCAGCGC
TCGCTGCCGC AAAAGGCGAC GCAGGCGGTC AACGCGCTGC TGCTCGAACG CGGCTGGCGC
AAGGACCAGG TGCTCGAGGC GTACCTGAAC CTCGTGCCGT TCCGCGGCGA GACGATCGGC
CTCGCCGCGC TGTCGCAAGT GCTGTTCGGC AAGGCGCCGT CGGGCCTCGA CGCCCGCGAA
GCCGCGATCG CGGCCGCGCT CGTGCGCGCG CCCAATGCCA CGCCCGCGAA AGTCGCCGAG
CGCGCGTGCC GGATCCTGCG CGACATGCAT GCCGAGCAGG CCTGCGCGTC GCTCGACGGT
TACGTGCAGC TCGTCATCGC GCGTCCGGCC AGCGCCGCGC GCGACGACGG CGCCGCCCTC
GCCCCGCACT TCGCACGACG CATCGCGGCC GAGGTGCGGC CAACGGCCGG CGCGCAGGTG
CGCACGACGC TCGATGCGCC GCTGCAGCGC TTCGCGCGCG ACACGCTGGT GCGCGCGCTG
ACCGAACTCA ACGCGCCGGC ACACCGGCGC AACGTGCAGG ACGGCGCGGT CGTCGTGATC
GACAACGCGA CCGGCGAGAT TCGCGCGTGG GTCGGCTCGT CCGGCGCGCT GTCGAGCGCG
CGCGACGTCG ATGCCGTGCT CGCGCCGCGC CAGGCCGGCT CGACGCTCAA GCCGTTCCTG
TATGCGCAGG CGATCGACGA GAAGCGCCTG ACGGCCGCGT CGCTGCTCGA CGATGCGCCG
ATCAACCTCG CCGCCGGCGG CGGCCTGTAC ATTCCTCAGA ACTACGACAA GGATTTCAAG
GGCTGGGTGA GCGTGCGCAG CGCGCTCGGC GGCTCGCTGA ACGTGCCGGC CGTGCGCACG
CTCGTGCTCG TCACGCCGCA CCGCTTCGCG CGCACGCTGA CCGCGCTCGG CCTGCCGCTC
GCGCAGGAAG GCGACTATTA CGGCTTCAGC CTCGCGCTCG GCAGCGCGGA CGTCACGCTG
CTGTCGCTGA CCAATGCGTA TCGCGCGCTC GCGAACGGCG GCGTTGCCCG CAAGGCCATC
GACCTGCCCG CGCCGGCACC GGCGTCCGGC GCGTCGACCG CCTCGCCCGC CCGCGCGGCC
GACGGCACGC GCGTGTTCAG CGAGGCAGCC AGCTTCGTCG TGACCGACAT CCTCTCCGAC
AACAACGCGC GCGTGCGCAC GTTCGGCTTC GACAATCCAC TCGCGACGCG CTTCTTCTCG
GCGGTCAAGA CCGGTACGAG CAAGGATATG CGCGACAACT GGACCGTCGG CTTCACGTCG
CGCTATACGG TCGGCGTGTG GGTCGGCAAT GCGGACGGCT CGCCGATGTG GGACGTGTCG
GGCGTCACGG GCGCGTCGCC CGTGTGGTCG GCCGTCGTCG GCTACCTGCA CCGCGACCAG
CCGAGCCGCG CGCCGCGCGC GCCGGCCGGT GTGGAGACGC GCCGCATCAC GTTCGAACGC
GATATCGAAC CGTCACGCAA CGAGTGGTTC ATCGCGGGAA CGGCGGTCGA CACGATCCGG
CTCGCCGCCC CCGTCACGCC GGGCAAGGAC GGCGCACGCG CGCCGCTGAC GATCGGTACG
CCGACCGACG GCACGATCTT CGCGATCGAC CCGGACATTC CGCCGAAGAA CCAGCGAATC
TGGTTCGAGC GCTCGGCCGG GCGCGCGACG AAATTCGCGT GGCGGCTCGA CGACAAGGTG
ATCGGGCATG CCGATCGCAT CGCATGGATG CCGTGGCCGG GCCGGCACCG GCTCGAACTC
GTCGATGCGC GCGGCAATGT GGCCGATACG ATCAGCTTCG AGGTGCGCGG CGCATTCGCG
AAGGCGGCCG CGCGCAAGCC GTGA
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| Protein sequence | MIDLALPRPA RFAGRVFVAI VLAAPLVAHA LPSYDEVRRN WRSSDWVLLA RDGTPLQRTR
VDLTERRGDW VSLADVSPAF REAIVVSEDK RFYEHSGVDW RGIAGAAWGN LWNERTRGAS
TVTMQLAGLL SDSPRRSGQR SLPQKATQAV NALLLERGWR KDQVLEAYLN LVPFRGETIG
LAALSQVLFG KAPSGLDARE AAIAAALVRA PNATPAKVAE RACRILRDMH AEQACASLDG
YVQLVIARPA SAARDDGAAL APHFARRIAA EVRPTAGAQV RTTLDAPLQR FARDTLVRAL
TELNAPAHRR NVQDGAVVVI DNATGEIRAW VGSSGALSSA RDVDAVLAPR QAGSTLKPFL
YAQAIDEKRL TAASLLDDAP INLAAGGGLY IPQNYDKDFK GWVSVRSALG GSLNVPAVRT
LVLVTPHRFA RTLTALGLPL AQEGDYYGFS LALGSADVTL LSLTNAYRAL ANGGVARKAI
DLPAPAPASG ASTASPARAA DGTRVFSEAA SFVVTDILSD NNARVRTFGF DNPLATRFFS
AVKTGTSKDM RDNWTVGFTS RYTVGVWVGN ADGSPMWDVS GVTGASPVWS AVVGYLHRDQ
PSRAPRAPAG VETRRITFER DIEPSRNEWF IAGTAVDTIR LAAPVTPGKD GARAPLTIGT
PTDGTIFAID PDIPPKNQRI WFERSAGRAT KFAWRLDDKV IGHADRIAWM PWPGRHRLEL
VDARGNVADT ISFEVRGAFA KAAARKP
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