| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5973 |
|---|
| Symbol | |
|---|
| ID | 3751204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 3103544 |
|---|
| End bp | 3104140 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637764292 |
|---|
| Product | general secretion pathway protein H |
|---|
| Protein accession | YP_370211 |
|---|
| Protein GI | 78067442 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0600966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAG CTTTTTCCGT TTCCCTGTTC CGTCGCGTGG CCGCCGATCT GCGGCGCGCG
AACCGGCCGT CGCCGCGCTG GCGGCCGGCC GGCTTTACGC TGATCGAACT GATGATCGTG
CTGGCGATCG TCGGTGTGAT CGCGGCGTAT GCGATACCCG CTTACCAGGA TTACCTTGCG
CGCTCGCGCG TCGGCGAGGG CCTTGCGCTC GCGTCGTCCG CGCGGCTCGC CGTCGCCGAC
AACGCCTCGA GCGGCGCGAG CCTCGACGGC GGCTACAGCC CGCCTGCCGC GACCCGCAAC
GTCGAATCGG TAGCGATCGA CGGCGAGACC GGCCAGATTA CGGTCGCATT CACCACGCGC
GTCACCGCGG CCGGCGCCAA TACGCTGGTG CTCGTGCCGT CCGCGCCCGA CAAGGCCGAT
GCGCCCACCG CCCGCGTGCC GCTCAAAAAG GGCGCGATGC AAGCCGGTGC GATCGCGTGG
GAGTGCTTTG CGGCCGGCAA GGATGCATCG TCGCTGCCGG CACCGGGAGC CGGGCCATTG
CCGGGTGACG CCGCGACGTT GCCAGCGAAA TATGCACCGG CGGAGTGCCG CGCGTAG
|
|---|
| Protein sequence | MFEAFSVSLF RRVAADLRRA NRPSPRWRPA GFTLIELMIV LAIVGVIAAY AIPAYQDYLA
RSRVGEGLAL ASSARLAVAD NASSGASLDG GYSPPAATRN VESVAIDGET GQITVAFTTR
VTAAGANTLV LVPSAPDKAD APTARVPLKK GAMQAGAIAW ECFAAGKDAS SLPAPGAGPL
PGDAATLPAK YAPAECRA
|
|---|
| |