| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5579 |
|---|
| Symbol | tpiA |
|---|
| ID | 3750807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 2675845 |
|---|
| End bp | 2676600 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637763895 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_369817 |
|---|
| Protein GI | 78067048 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000123744 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0751441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC AGAGAACTAA GCGTGTGATC GGCAACTGGA AGATGCACGG CCGGCTGGCC
GGCAACCAGG CGTTGCTGAA CGAAGTGGTG CAGGGCGCGG GCGCGGTGGC GGCCGAAACG
TCGATCGGCG TGTGCGTGCC GTTCCCGTAT CTCGCGCAGG TTCAGGCGCA GCTCGACGGC
GGCCGTGTCG CCTGGGGTGC GCAGGACGTG TCGGCGCACG AACAGGGCGC GTTCACCGGT
GAAGTCGCGG CCGCGATGGT CGCGGAGTTC GGCGCACGCT ATGCGATCGT CGGTCACTCG
GAGCGCCGCG CGTATCACGG CGAACGCAAC GAGACGGTCG CCGCGAAGAC GCAGCGCGCG
CTCGCAGCGG GGCTCACGCC AGTCGTGTGC GTTGGCGAGA CGCTCGACGA GCGCGAGTCG
GGTGCGACCG AGCAGGTGGT CGGTGCGCAG CTCGACGCAG TGCTGGCCGT GCTGACGGCT
GACGAAGCGA CGCGCATCGT CGTCGCATAC GAGCCGGTCT GGGCGATCGG CACGGGCAAG
AGCGCGACGT CGGCGCAGGC ACAGGACGTG CACGCGTTCC TGCGTGCGCG TCTCGCGGCA
AAGGGTGCGG CGGACGTGTC CGTGCTGTAC GGCGGCAGCG TTAAGCCGGA CAACGCGGAA
GAGCTGTTTG CGCAGCCGGA CATCGACGGC GGCCTGATCG GCGGCGCGTC GCTGAAGGCG
GAAGATTTCC TGGCGATCTG CCGGGCCGCG CGTTGA
|
|---|
| Protein sequence | MSKQRTKRVI GNWKMHGRLA GNQALLNEVV QGAGAVAAET SIGVCVPFPY LAQVQAQLDG
GRVAWGAQDV SAHEQGAFTG EVAAAMVAEF GARYAIVGHS ERRAYHGERN ETVAAKTQRA
LAAGLTPVVC VGETLDERES GATEQVVGAQ LDAVLAVLTA DEATRIVVAY EPVWAIGTGK
SATSAQAQDV HAFLRARLAA KGAADVSVLY GGSVKPDNAE ELFAQPDIDG GLIGGASLKA
EDFLAICRAA R
|
|---|
| |