| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5216 |
|---|
| Symbol | |
|---|
| ID | 3750425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2266671 |
|---|
| End bp | 2267972 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637763512 |
|---|
| Product | D-amino-acid dehydrogenase |
|---|
| Protein accession | YP_369454 |
|---|
| Protein GI | 78066685 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.386059 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCA TCGTCATCGG CGGCGGAATC AGCGGCGTCG CCACCGCCTA CCAGTTGCGC
GCGGCCGGCC ATCGCGTGTG CGTGGTCGAA CGCCACGCGA CCGTCGCGCA AGGTGCAACC
TACGGCGACG GCGGCGCACT GCTGCCGAGC CCGCTCGACG TCTGGTTCGG CCCGACCTTC
ATGCGCCAGC GCCAGCCGCG CGACACCGGC ATCGTCTACA AGCCGGGCTT CAACGGCGGC
GTGCGCCGCT TCGTCAAGCA GCTCGGCACG CTGCGCGAGC CCGACGCGTT CGCCGCCCAG
TACGCGCGGC TGCGCCCGCT GATCGACGCG TCGCGCGACA CGCTCGCCGA CATCGAGACG
CGCCTCGAGC TCGAATTCGA ACAGAAGCCC GGCATCCTGC ACGTGGTGCG CGACCCGCGC
GACTGGGACG CGATGCAGCC CGCGCTCGAC CTGCTGCGCA CGCTCGACCA GCCGTACCGC
CTGCTCTCCG CCGACGAATG CGCGGTGCTC GAGCCGTCCG TGCCGGCCGA GCCCGGCTTC
GCCGGCGGCG TGCTGCTCGA AACCGAACGC ACCGGCAATT GCCCGCTGTT CGCGAAACTG
GTCAAGCAGA CGCTCGACGA GCATGGCGTG CAGTTTCGCT TCGGCGCGGA AGTCGCCGCG
ATCCGCGTCG ATACCGGCCG CGCCGCGGTC GAGCTCGTCC CGCCCGGCGA CCGGCGCGCG
TCGAACGCTC GCGAGGTCGA CGTGATTTCC GCCGATGCGA TCGTGGTCGC CGCCGGCGCC
GGCAGCCTGC CGCTGCTCGA CCGGCTCGGC TGGCGCCTGC CGCTGCACCC GGTGCGCGTC
CATACGCTCA CCGCACCGGT CGCCTACGAA GAACACGCAC CGCACCTGAA CGTCATCGAT
TCGATCAAGC GGATCTCGAT CACGCGCACC CACCAGCGGC TGCGCGTCGG CGGCGGCGCC
GTACTGCAAA GCCTGCCCGA CACCGCGAAG CCGCTCGCCG AACCGCTGTC CGAGGCCGCA
CTCGCGCTGC TCGGCCAGGC CGTCCACGAC TGGGTGCCCG GCGCCGCGCG GATCTCGGCC
GCGCTGTCGT GGCAAGGCAC GCAGTTGCTG TCACCGGACG GCCTGCCGGT CGTCGGTCCG
ACCCCGCATC CGCGCGTGTT CGTCAATTTC GGGCACGGCC CGGCCGGCTG GGGGCTCGCA
TGCGGGTCTG CTAAAGTGGT GACCGACTAC CTGGGCGGCG ACGTGCAGCA CTGGCCCGCC
GACACGCTCG CCGCGCTGCG CGCCGGGCGC TTCACGACCT GA
|
|---|
| Protein sequence | MDVIVIGGGI SGVATAYQLR AAGHRVCVVE RHATVAQGAT YGDGGALLPS PLDVWFGPTF
MRQRQPRDTG IVYKPGFNGG VRRFVKQLGT LREPDAFAAQ YARLRPLIDA SRDTLADIET
RLELEFEQKP GILHVVRDPR DWDAMQPALD LLRTLDQPYR LLSADECAVL EPSVPAEPGF
AGGVLLETER TGNCPLFAKL VKQTLDEHGV QFRFGAEVAA IRVDTGRAAV ELVPPGDRRA
SNAREVDVIS ADAIVVAAGA GSLPLLDRLG WRLPLHPVRV HTLTAPVAYE EHAPHLNVID
SIKRISITRT HQRLRVGGGA VLQSLPDTAK PLAEPLSEAA LALLGQAVHD WVPGAARISA
ALSWQGTQLL SPDGLPVVGP TPHPRVFVNF GHGPAGWGLA CGSAKVVTDY LGGDVQHWPA
DTLAALRAGR FTT
|
|---|
| |