| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4745 |
|---|
| Symbol | |
|---|
| ID | 3749953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 1735971 |
|---|
| End bp | 1736921 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637763042 |
|---|
| Product | ABC sugar transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_368984 |
|---|
| Protein GI | 78066215 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.193376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.645584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTCC TCTTTCGCCG TCGCTTCCTG ACCGCCGCGC TCGCCGCCGT CGCGGTTGCC
GCCGCACCGG CCGTCCACGC GCAATCGGCG GGCAAGCCGA AGGTCGCGCT CGTGATGAAG
TCGCTCGCCA ACGAGTTCTT CCTGACGATG GAAACGGGCG CGAAGGAATA CCAGAAACAC
AACGCGGGTC AGTTCGACCT GATCACCAAC GGCATCAAGG ACGAGACCGA CACCGCGAAC
CAGATTCGCA TCGTCGAGCA GATGATCGTG TCGAAGGTCG ACGCGATCGT GCTCGCGCCG
GCCGATTCGA AGGCGCTCGT GCCGGTCGTG AAGAAGGCGG TCGACGCGGG CATCATCGTC
GTGAACATCG ACAACCGGCT CGATCCCGAC GTGCTGAAGT CGAAGAACCT GAACGTGCCG
TTCGTCGGCC CGGACAACCG CAAGGGCGCG CGCAAGATCG GCGATTACCT CGCGAAGCGG
CTGAAGGCGG GCGACCAGGT TGGCATCGTC GAAGGCGTGT CGACGACGAC CAATGCGCAG
CAGCGCACGG CCGGCTTCCA GGACGCGATG AAGGCGGGCG GGATGAAGGT CGTGTCGGTG
CAGTCCGGCG AATGGGAGAT CGACAAGGGC AATGCGGTCG CTGCCGCGAT GCTCAACGAA
TATCCGAACC TGAAGGCGCT GCTGTGCGGC AACGACAACA TGGCGATCGG CGCCGTGTCG
GCCGTGCGCG CGGCCGGCAA GCAGGGCAAG GTGCTCGTGG TCGGCTACGA CAACATCAAT
GCGATCAAGC CGATGCTGAA GGACGGCCGC GTGCTCGCGA CCGCCGATCA GTACGCGGCG
AAGCAGGCCG TGTTCGGTAT CGACACGGCA CTCAAGGCGA TCGCCGAGCA TCGCAAGCAG
GCCGACATGT CGGGCGTGGT CGAGACGCCG GTGGATCTCG TGACGAAGTG A
|
|---|
| Protein sequence | MNVLFRRRFL TAALAAVAVA AAPAVHAQSA GKPKVALVMK SLANEFFLTM ETGAKEYQKH
NAGQFDLITN GIKDETDTAN QIRIVEQMIV SKVDAIVLAP ADSKALVPVV KKAVDAGIIV
VNIDNRLDPD VLKSKNLNVP FVGPDNRKGA RKIGDYLAKR LKAGDQVGIV EGVSTTTNAQ
QRTAGFQDAM KAGGMKVVSV QSGEWEIDKG NAVAAAMLNE YPNLKALLCG NDNMAIGAVS
AVRAAGKQGK VLVVGYDNIN AIKPMLKDGR VLATADQYAA KQAVFGIDTA LKAIAEHRKQ
ADMSGVVETP VDLVTK
|
|---|
| |