| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3488 |
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| Symbol | |
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| ID | 3748665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 351118 |
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| End bp | 352749 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637761762 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_367734 |
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| Protein GI | 78064965 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC ACGGATGTCG GGTGCTCGCC GTTTGGGCCG GATTGACCGC GGCCAGTGCA
AGCGCGTCAT TGCCGCCGCT GCCGGCCGTC TGGCCTGCCG CAGCGTTGGA TACGCAGGTG
CCGGGCGTGC CGTTGCCACA AGGCGCGGTG GACGGTGCGG ATCACACCGT CTCGACGGAG
GCCGGCCCGC CGCCGTTCGA CCAGGCGGCT CGCGCGGTGC TTCAAGCGGA AGCCACCACC
ACGGCAGCCG GGCTGGAGGG GCCGCCGATC CCGCTGGCGC CGCCGGCCCG GATGGGCGAT
GCTGCGGCCC GGCAACCGGG CGATGCGGAC GACACGCGGC GAATCTCGCT GAATCTGCAG
GGCGCGGGGC TCGCGGCCGC GTTCGACGCG TTCGCGCGGT TCACCGGACT CAATATCGTC
GTCGGCGAGC AGGTGCGTGG CACCGTCACG TTACGTCTGA ACAATGTGCG CTGGCGCGAT
GCCTTCGACA CGCTGCTCGA CACGCACGGG CTCGCGATGT CCCGGCGGGG CAGCGTGATA
TGGGTCACGC CGGCGGCCGA GCTGGCCGCG CGCGAACGCG AGCGCTTCGA AATGCACGCG
CGGGCCGCCG ATCTGGAGCC GCTTGCGAGC CGGACCTTCG CGCTGCACTA CCCGCGCGCG
CAGGACGTGC AACGGCTGCT GGCCGGCGCG ACCGGCCAGC GCCTGCTGTC GAAGCGCGGC
GCCGCGGCGG CCGATCCGCG CACGAACCTG CTGTTCGTCA CCGATCTCGC GCCGCGTCTC
GATCAGGTCG CGAGCCTGAT CGAGGCGATC GACCGGCCGT CGCGGCAAGT CCGGATCGAG
GCCCGCATCG TCGAGGGCGA GCAGGGTTTT TCGCGCAATC TCGGCGCGCG CGTCGCGCTG
CGGGCGCAGG GGCGGCCGCC GTCGGGCGAG AGCGCCACGT TCACGACCGG TGCGCGCAAC
GCGCTCGACC TGGCTGCGCG GCCGCTCGGC GGCTTCGAAG CGGCAACCGC CGGCTTCACG
CTGTTCGCCG CGCCGCTCAG CCGTGTGCTC GACGTCGAAC TGAGCGCGCT CGAGGCTCAG
GGGCGGGGCC AGATCGTCTC GAGTCCGCGC GTGGTGACCG CCGATCGCGT CAAGGCCATC
GTCGAACAGG GTTCGGAGGT GCCGTACCAG GCGAAGGTCG GCAACGGCGT GAGCGGCGTG
CAGTTCCGCC GGGCGACGCT CAAACTGGAG GTCGAGCCCC AGATCACGCC AGACGGGCGC
GTGGTACTCG ACCTGGACGT GACGAAGGAC AGCATCGGCG AGCCGACGGC GGCCGGCCCG
GCGATCCATA CGAAACACGT CCAGACGCGT GTCGAGGTCG AAAACGGCGG GACGGTGGCG
ATCGGCGGGA TCTATGAGCA ACTGAACAGG AACGATGTGA CGCGCGTGCC GCTCTTGGGC
AAAATACCGT TTCTGGGCGC GCTTTTCCGG CACCGCGCGC AACGCGATCA GCGCAACGAA
CTGGTCGTCT TCATCACGCC GACCGTCGTC GATGCGCGCT GCAATGAGCG CGGCGCGGCC
GGTGCGGATG CCGAAAAAAC AGGGCCGGAA GCCGCCGGCG CAGGCTCGAC AAGGCAGCCG
CTTTGCCAGT AA
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| Protein sequence | MMKHGCRVLA VWAGLTAASA SASLPPLPAV WPAAALDTQV PGVPLPQGAV DGADHTVSTE
AGPPPFDQAA RAVLQAEATT TAAGLEGPPI PLAPPARMGD AAARQPGDAD DTRRISLNLQ
GAGLAAAFDA FARFTGLNIV VGEQVRGTVT LRLNNVRWRD AFDTLLDTHG LAMSRRGSVI
WVTPAAELAA RERERFEMHA RAADLEPLAS RTFALHYPRA QDVQRLLAGA TGQRLLSKRG
AAAADPRTNL LFVTDLAPRL DQVASLIEAI DRPSRQVRIE ARIVEGEQGF SRNLGARVAL
RAQGRPPSGE SATFTTGARN ALDLAARPLG GFEAATAGFT LFAAPLSRVL DVELSALEAQ
GRGQIVSSPR VVTADRVKAI VEQGSEVPYQ AKVGNGVSGV QFRRATLKLE VEPQITPDGR
VVLDLDVTKD SIGEPTAAGP AIHTKHVQTR VEVENGGTVA IGGIYEQLNR NDVTRVPLLG
KIPFLGALFR HRAQRDQRNE LVVFITPTVV DARCNERGAA GADAEKTGPE AAGAGSTRQP
LCQ
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