Gene Bcenmc03_6852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6852 
Symbol 
ID6125764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp950341 
End bp951495 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID641647859 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001774451 
Protein GI170735337 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID[TIGR03203] pimeloyl-CoA dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTG ATTTCACCGA TGAGCAACGC ATGCTCAAGG ACAGCGTCGA GCGCCTCGTC 
AAGGACGAGT ACGGCTTCGA GCAGCGCGCG AAGTACCTGG CGGAGGCCGA CGGCTTCAGT
CGTGCGCAAT GGGCGCGCTA TGCGGAAATG GGGCTGCTGG GCCTTTCATT CGACGAGGCG
TACGGCGGCA GCAACTGCGG CCCCGTTGAA ACGATGATCG TGATGGAGGC GTTGGGCCGC
GGTCTCGCGG TCGAGCCGTA CCTGGCCACG GTCGTACTGG GCGGCGGCTT GGTGCGCATT
GGCGGCAACG CTGCGCAACG CGAGGCGATT CTGCCGAAGA TCGCGCAGGG CGAGCTGCTG
ATGGCCTTCG CGCATGGCGA AGCGCAGGCG CGGTACGACC TGGCGGACGT GGCGACCACC
GCGCGGCGCG AAGGCGACGC ATGGATCATC GACGGCGCGA AGCGCATCGT GCTGCACGGC
GACAGCGCTG ATCTTCTCGT GGTGTCGGCG CGCGTGTCGG GCAGCAGGCG CGAGCGTGAC
GGCATCGGAC TGTTCGTGGT CAGGGGCGAC GCGGCGGGCG TGACCCGCCG CGGATATCCG
ACGCAAGACC GGCTGCGCGC GGCCGACATC GAATTGTCGG GCGTGCGCGT TCCGGATAGC
GACGTACTGG GCGTCGCGGG TGCCGCATTG CCGCTGATCG AAACGGTCGT CGCGCACGCG
ATTGCCGCGG TGAGCGCGGA AGCCGTCGGC GCGATGGCCG CCGCGCACGA AGAGACCGTC
GAGTATCTGA AGGTCCGCAA GCAGTTTGGC CAGCCGATCG GTTCCTTCCA GGCCCTCCAG
CATCGCGCCG TCGACATGCT GGTCGCGGTC GAGCAGGCAC GCAGCATGGC GCTCTTCGCA
ACCATGATGG CCGACGAGCC GGATGCGGCG GAACGCGACC GCAGCATGGC CGCGTCGAAA
GTGCAGATCG GGCGCTCGGG CCGCTTCGTC GGCCAGCAAG GCGTGCAATT GCACGGCGGC
ATCGGGATGA CCGAGGAGTG CAAGGTCGGC CATTACCTGC GACGCCTCAG TGTCATCGAT
ATCCAGTTCG GCTCGACCGA GCATCATCTC GCCCAGCTCG CCGATGCCGG CGGGCTGATC
GACGCAGCAG CGTGA
 
Protein sequence
MDFDFTDEQR MLKDSVERLV KDEYGFEQRA KYLAEADGFS RAQWARYAEM GLLGLSFDEA 
YGGSNCGPVE TMIVMEALGR GLAVEPYLAT VVLGGGLVRI GGNAAQREAI LPKIAQGELL
MAFAHGEAQA RYDLADVATT ARREGDAWII DGAKRIVLHG DSADLLVVSA RVSGSRRERD
GIGLFVVRGD AAGVTRRGYP TQDRLRAADI ELSGVRVPDS DVLGVAGAAL PLIETVVAHA
IAAVSAEAVG AMAAAHEETV EYLKVRKQFG QPIGSFQALQ HRAVDMLVAV EQARSMALFA
TMMADEPDAA ERDRSMAASK VQIGRSGRFV GQQGVQLHGG IGMTEECKVG HYLRRLSVID
IQFGSTEHHL AQLADAGGLI DAAA