| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6716 |
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| Symbol | deoA |
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| ID | 6125638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 804348 |
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| End bp | 805664 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641647733 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001774325 |
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| Protein GI | 170735211 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTAC CGCAGGAATT CATTCGCAGG AAGCGCGACG GGCAGCCGCT CGATCGCGAC
GGCATGGCCG CGTTCGTGCG CGGCGTGACC GACGGCAGCG TGACCGAGGG CCAGGTGGCC
GCGTTCGCGA TGGCCGTGTA TTTCAACGAC CTGAGCACCG ACGAGCGCGT CGCGCTGACG
CTCGCGCAGC GCGATTCGGG CGACGTGCTC GACTGGCGTG CGCTCGGTCT CGGCGGCCCG
GTGATCGACA AGCATTCGAC GGGCGGCGTC GGCGACGTCG TATCGCTGAT GCTCGGGCCG
ATGGTGGCCG CGTGCGGCGG CTACGTGCCG ATGATCTCGG GGCGCGGGCT CGGCCATACC
GGCGGCACGC TCGACAAGTT GAGCGCGATC CCCGGTTACG ACGTGATGCC CGATACGGAT
GCGTTTCGCC GCACGGTGCG CGAGGTCGGC GTCGCGATCA TCGGCCAGAC CGCGCGGCTC
GCGCCGGCCG ACAAGCGCAT CTATGCGATC CGCGACGTGA CGGCGACCGT CGAATCGGTC
GCGATGATCA CCGCGTCGAT CCTGTCGAAG AAGCTCGCGG CGGGGCTCGA CGGGCTCGTG
ATGGACGTCA AGGTCGGCTC CGGCGCGTTC ATGCCGACCG CGGAGAAATC GGCGGAACTG
GCCCGCAGCA TCGTCGACGT CGGCAATGGC GCCGGCATGA AGACGACCGC GATCCTCACC
GACATGAACC AGTCGCTCGC GCCGTGCGCG GGCAATGCGC TCGAGGTCGC GTGCGCGATC
GACTACCTGA CGGGCAAGTC GCGTCCCGCG CGTCTGCACG ACGTGACGAT GGCGCTGTCG
GCGGAGCTGC TCGTCACCGG CGGGCTGGCG CGCGATGCTG CCCATGCGCG CGAGAAGCTG
CAGCAGGCAC TCGATTCGGG CGCGGCCGCC GAGCGTTTCG CGCGCATGGT CGTCGCGCTC
GGCGGCCCCG CCGACCTGCT CGACGCGCCC GCGCGGCATC TGGCGCGGGC GGCGGTGATC
GTGCCGGTTC CGGCGCCCGC GAGCGGCGTG GTGCAGCGGG TCGATTGCCG CGCGCTAGGG
CTCGCGGTGG TCGCGCTCGG CGGCGGCCGC ACGCGCGCGG AGGATGCGAT CGACGTCAGC
GTCGGCCTGT CGGCGCTTGC CGAGATCGGG CAGCGCATCG AGTCCGGCGA GCCGCTTGGT
TTCGTGCACG CTCGCGACGA AGCGGCCGCG GCGCACGCGG CGGACGCGAT CCGCCGCGGC
TACGTGCTCG GCGACACGGG CGAAGCGCCG CCGACCCTTT ACCGGCAGAT CGGCTGA
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| Protein sequence | MFLPQEFIRR KRDGQPLDRD GMAAFVRGVT DGSVTEGQVA AFAMAVYFND LSTDERVALT
LAQRDSGDVL DWRALGLGGP VIDKHSTGGV GDVVSLMLGP MVAACGGYVP MISGRGLGHT
GGTLDKLSAI PGYDVMPDTD AFRRTVREVG VAIIGQTARL APADKRIYAI RDVTATVESV
AMITASILSK KLAAGLDGLV MDVKVGSGAF MPTAEKSAEL ARSIVDVGNG AGMKTTAILT
DMNQSLAPCA GNALEVACAI DYLTGKSRPA RLHDVTMALS AELLVTGGLA RDAAHAREKL
QQALDSGAAA ERFARMVVAL GGPADLLDAP ARHLARAAVI VPVPAPASGV VQRVDCRALG
LAVVALGGGR TRAEDAIDVS VGLSALAEIG QRIESGEPLG FVHARDEAAA AHAADAIRRG
YVLGDTGEAP PTLYRQIG
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