| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6636 |
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| Symbol | |
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| ID | 6125559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 701707 |
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| End bp | 702834 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641647649 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001774246 |
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| Protein GI | 170735132 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.992107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCA TTTCCGCATC GCCGCGCCCG CTCAATCTTC GTGTCGTTAG CGCTTCCCGC
GACCCCGCAG GCCTTCAAGC CGCGGCGCCG GTGCTTACGC TGCCCGAACG CCACGCGCAG
GCCCGTGCGC AGGCGCAGGT GTTCGCCGAT CCGCGTTCGC TCGCGCTGCT CGAACAGGTT
CGCCGCGTCG CACCGAGCGA CGCGAACGTG CTGATCGTCG GCGAGACGGG CACCGGCAAG
GAACTGATCG CACGCCACGT GCACGAGCTC GGCGCCCGTC GCGACGGGCC GTTCGTCGCG
GTGAACTGCG GCGCGTTCTC TGAGACGCTC GTCGATAGCG AACTATTCGG CCACGAGAAA
GGCGCGTTTA CCGGCGCATT CAGCGCGAAG CCCGGCTGGT TCGAAGCCGC GCACGGCGGC
ACGCTGTTTC TCGACGAAAT CGGCGACCTG CCGCTCGCGA TGCAGGTGAA ACTGCTGCGC
GTGCTGCAGG AGCGCGAGGT CGTGCGGCTC GGTTCGCGCA CCGGGATTCC GGTCGACGTA
CGGGTGGTCG CGGCGACCAA CGTCGACTTG CAGCAGGCGG TCGCGGCCGG GCAGTTTCGC
GGCGACCTGT TCTACCGGCT CAACGTCGTG CAACTCGCAG TGGCGCCGTT GCGCGACCGC
CCGGGCGACA TCCTGCCGCT TGCGCGCCAC TTCTTCGACA TTTATCGCGA CCGGCTCGGC
GGCGGCCCGC GCCGCATCGA TCCGCGCGCC GAGCGACGGC TCCAGGCGCA CGGCTGGCCC
GGCAATATCC GCGAACTGGA GAACGTGATT CATCACGCGC TGCTCGTGAG CCATCACGAC
ACGTTGCAGG ACACCGACCT GCACATCGCG CCGCCGTGCC TGCCGGCGGC TGCCGCGCCC
GCAGCCGAAT CGTCCGCCGA CGCACAAGCG GCGCTCGAAC ACGTGTTGCG CGACCTGTTC
GACGACGGGC ACGGCAACCT GTTCGAACAC ATCGAGGACA CCGTGATGCG TGTCGCGTTC
GAGTTCAGCC ATCGCAACCA GATCCGCGCC GCGCAGTTGC TCGGCATCAG CCGCAACGTG
CTGCGCGCCC GGCTGATTCG CGCGAAGGCG ATCACCGCGC TGAAATAG
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| Protein sequence | MTSISASPRP LNLRVVSASR DPAGLQAAAP VLTLPERHAQ ARAQAQVFAD PRSLALLEQV
RRVAPSDANV LIVGETGTGK ELIARHVHEL GARRDGPFVA VNCGAFSETL VDSELFGHEK
GAFTGAFSAK PGWFEAAHGG TLFLDEIGDL PLAMQVKLLR VLQEREVVRL GSRTGIPVDV
RVVAATNVDL QQAVAAGQFR GDLFYRLNVV QLAVAPLRDR PGDILPLARH FFDIYRDRLG
GGPRRIDPRA ERRLQAHGWP GNIRELENVI HHALLVSHHD TLQDTDLHIA PPCLPAAAAP
AAESSADAQA ALEHVLRDLF DDGHGNLFEH IEDTVMRVAF EFSHRNQIRA AQLLGISRNV
LRARLIRAKA ITALK
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