| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6556 |
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| Symbol | |
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| ID | 6125479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 609303 |
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| End bp | 610502 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641647569 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001774166 |
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| Protein GI | 170735052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.254371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.769115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAT ATCCAGGATT GAAGCGCATC GCGCGATCGG CCGCGCTGGC CGCCGTTCCG
CTGGCCGCGC TCTTCGCGTT GTCCGGCTGC CAGTCGGACG ACAAGGCCCC GGCCGCGACG
CCGAGCGTGA TCGTCAGCGC GCCCGTCGCG CGCGACGTCA ACGACGTCGA CGTCTACACC
GGCCGCTTCG AGGCGGTCGA CACCGTCGAC GTGCGCCCGC GCGTGAGCGG CTATCTCGAC
AAGGTTGCGT TCCAGGACGG CGCGATCGTC CGCAAGGGCG ACCTGCTGTT CGTCATCGAC
CCGCGCCCGT ACCAGGCGGC CGTCACCGCC GCGCAGGGCG CGCTCGAACG CGCGCAGTCG
CAACTGAAGC TGAGCCGGCA GGATTTCGAG CGCGCGAGCA TCCTGATCAA GACCGACACG
ATCGCGCAGA GCCTCTACGA CCAGCGCAGG CAGGCGGTGC AAAGCGCGCA GGCCGAGGTG
ACCAGCGCGC AAGGCGCACT CGAACGCGCG CGGCTCGACC TGTCGTTCAC GCGCATCGTC
GCGCCGATGT CCGGCCGCAT CAGCCGCAAA CTCGTGAGCG AGGGCAATCT CGTGAAAGGC
GGCGACAGCG ACGCGACCGT GCTGACGACG ATCGTGTCGC AGGACCCGAT CGACATCTAC
TTCGACGTCG ACGAGGAAAG CTACCTGCGC TATACGCGCG AAGCACGGAA AAGCGGCGGC
AACGCGTCGT CGCGGCAGGT CGCGATCGCG CTGCCGGGCG ACGCGCTACC GTCGCTGACG
GGGACGATGG ATTTCGTCGA CAACCGCCTC GACGACTCGA CCGGCACGCT GCGCCAGCGC
GCGCGCGTCG CGAATCCGGA CCGGCGCCTG AGCCCTGGCC AGTTCGGCCG CGTGTATCTG
TCGAGCCGCG TCGCGCACCC TGCGCTGCTC GTGCCGGATG CCGCCGTCGC GACCGATGCG
ACGCGCCGCG TGCTGTACTT CGTCGACGCG AACGGCACCG TCGCGATCCG CCCGGTGACG
CCCGGCCGCC TGTACGGCAA CCTGCGCGAG ATCGACGCGG GGCTGAAGGC AGGCGATACC
GTGATCGTCG ACGGCTTCCA GCGCGTGCAG GCCGGCGACA AGGTCAAGGC CGTGCCCCGC
GCGATCGAAG CGGCCACGGT GGCCCGCGCG GCGAGCGGCA CGACCGGGAG CGCGCAATGA
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| Protein sequence | MNRYPGLKRI ARSAALAAVP LAALFALSGC QSDDKAPAAT PSVIVSAPVA RDVNDVDVYT
GRFEAVDTVD VRPRVSGYLD KVAFQDGAIV RKGDLLFVID PRPYQAAVTA AQGALERAQS
QLKLSRQDFE RASILIKTDT IAQSLYDQRR QAVQSAQAEV TSAQGALERA RLDLSFTRIV
APMSGRISRK LVSEGNLVKG GDSDATVLTT IVSQDPIDIY FDVDEESYLR YTREARKSGG
NASSRQVAIA LPGDALPSLT GTMDFVDNRL DDSTGTLRQR ARVANPDRRL SPGQFGRVYL
SSRVAHPALL VPDAAVATDA TRRVLYFVDA NGTVAIRPVT PGRLYGNLRE IDAGLKAGDT
VIVDGFQRVQ AGDKVKAVPR AIEAATVARA ASGTTGSAQ
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