Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6484 |
Symbol | |
ID | 6125407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 538636 |
End bp | 539487 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641647497 |
Product | pirin domain-containing protein |
Protein accession | YP_001774094 |
Protein GI | 170734980 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.711582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAATA CCGTCGATTC CGTTCCCTCG ACCACCGTCG CCGGCCGTCA TGTCGTGTTC CGCACGCGCG GCCACGCGCA CGGGCCGGTC GTCCGCATGG TCAGCCCGTC CGACGTCGGC GAGATGATCA AGCCGTTCGT CTTCCTCGAC CTGATCGATA CGCGGGCGCC GCTCGGCAAG CCGGCCTTCG GCTGGCATCC GCATTCGGGC ATCGCCACGC TGACGCTCAT GATCGACGGG CACGGAACCT ACGCGGAATC GACGGGCCAC GCAGGCCCGA TGGGGGCCGG CGACATCGAA TGGATGAGCG CGGGCCGCGG CGTCTGGCAT ACGGGTTCCG TGGTGCCGCC GGTCAAGGCG TTCCAGCTGT GGGTGGCGTT GCCGCCGGGG CGCGAGCTGG CGCCGGCGTT CAGTCAGCAC CTGTCGATCG ACGACATCCC GACGGACGGG CCGGCCCGCG TGCTGCTCGG CCGTCACGGC GACGCGGTCA GCCCGGTCGA TGCGCCGCCT GGCATCAACT ACGTCGTCGT GCAGTTGAAG GCGGGCGAGC GCTGGACCTG CCGGCCGCCG CAGGGCCACC GGGTCGGCTG GACCGCCGTG ATGGACGGCC GCCTGCGCAC GCCGGACCCG GTCGGGCGGG GCGAGCTGGT CGTATTCGAC GCGTCCGACG CGCCGATCGA ATTCGAGGCC GTGACCGACG CGCGCTTCGT GGTCGGTACG GCGATTCCGC ATCCGCACGA TCTTCATCTG GGCGCCTACT CGGTGCACAC GAGCGCCGCC GCGCTGGTGG AAGGCGAGCG CGAAATCGTA CGTGTCGGCC GTGAACTGCG CGCCAGGGGC GTGATGCGCT GA
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Protein sequence | MLNTVDSVPS TTVAGRHVVF RTRGHAHGPV VRMVSPSDVG EMIKPFVFLD LIDTRAPLGK PAFGWHPHSG IATLTLMIDG HGTYAESTGH AGPMGAGDIE WMSAGRGVWH TGSVVPPVKA FQLWVALPPG RELAPAFSQH LSIDDIPTDG PARVLLGRHG DAVSPVDAPP GINYVVVQLK AGERWTCRPP QGHRVGWTAV MDGRLRTPDP VGRGELVVFD ASDAPIEFEA VTDARFVVGT AIPHPHDLHL GAYSVHTSAA ALVEGEREIV RVGRELRARG VMR
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