Gene Bcenmc03_6484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6484 
Symbol 
ID6125407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp538636 
End bp539487 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID641647497 
Productpirin domain-containing protein 
Protein accessionYP_001774094 
Protein GI170734980 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.711582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATA CCGTCGATTC CGTTCCCTCG ACCACCGTCG CCGGCCGTCA TGTCGTGTTC 
CGCACGCGCG GCCACGCGCA CGGGCCGGTC GTCCGCATGG TCAGCCCGTC CGACGTCGGC
GAGATGATCA AGCCGTTCGT CTTCCTCGAC CTGATCGATA CGCGGGCGCC GCTCGGCAAG
CCGGCCTTCG GCTGGCATCC GCATTCGGGC ATCGCCACGC TGACGCTCAT GATCGACGGG
CACGGAACCT ACGCGGAATC GACGGGCCAC GCAGGCCCGA TGGGGGCCGG CGACATCGAA
TGGATGAGCG CGGGCCGCGG CGTCTGGCAT ACGGGTTCCG TGGTGCCGCC GGTCAAGGCG
TTCCAGCTGT GGGTGGCGTT GCCGCCGGGG CGCGAGCTGG CGCCGGCGTT CAGTCAGCAC
CTGTCGATCG ACGACATCCC GACGGACGGG CCGGCCCGCG TGCTGCTCGG CCGTCACGGC
GACGCGGTCA GCCCGGTCGA TGCGCCGCCT GGCATCAACT ACGTCGTCGT GCAGTTGAAG
GCGGGCGAGC GCTGGACCTG CCGGCCGCCG CAGGGCCACC GGGTCGGCTG GACCGCCGTG
ATGGACGGCC GCCTGCGCAC GCCGGACCCG GTCGGGCGGG GCGAGCTGGT CGTATTCGAC
GCGTCCGACG CGCCGATCGA ATTCGAGGCC GTGACCGACG CGCGCTTCGT GGTCGGTACG
GCGATTCCGC ATCCGCACGA TCTTCATCTG GGCGCCTACT CGGTGCACAC GAGCGCCGCC
GCGCTGGTGG AAGGCGAGCG CGAAATCGTA CGTGTCGGCC GTGAACTGCG CGCCAGGGGC
GTGATGCGCT GA
 
Protein sequence
MLNTVDSVPS TTVAGRHVVF RTRGHAHGPV VRMVSPSDVG EMIKPFVFLD LIDTRAPLGK 
PAFGWHPHSG IATLTLMIDG HGTYAESTGH AGPMGAGDIE WMSAGRGVWH TGSVVPPVKA
FQLWVALPPG RELAPAFSQH LSIDDIPTDG PARVLLGRHG DAVSPVDAPP GINYVVVQLK
AGERWTCRPP QGHRVGWTAV MDGRLRTPDP VGRGELVVFD ASDAPIEFEA VTDARFVVGT
AIPHPHDLHL GAYSVHTSAA ALVEGEREIV RVGRELRARG VMR