| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6103 |
|---|
| Symbol | |
|---|
| ID | 6125078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 93382 |
|---|
| End bp | 94584 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641647122 |
|---|
| Product | sugar efflux transporter |
|---|
| Protein accession | YP_001773719 |
|---|
| Protein GI | 170734605 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.542417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCC CCGACGCCGT CAGTTCCGAA CAATCGTGGT GGGGCGTTCT GGCCCTGGCA
CTCACCGCCT TCATCTTCAA TACCACCGAA TTCGTGCCCG TCGCGCTGTT GAGCGCGATC
GGCGACAGCC TGCAGATGCA GCCGACCGCG GTCGGCCTGA TGCTGACGAT CTACGCGTGG
GCCGTCGCGG TCGTGTCGCT GCCGCTGACG TTCGTCACGC GCCACGTCGA GCGCCGCAAG
CTGTTGAGCG TGGCGTTGCT GGTGTTCATC GGCAGCCATG TCGTGACCGG CGTCGCGTGG
AATTTCACGG TGCTGATGAT CGGCCGGCTC GGCATCGCGT GTGCGCATGC GGTGTTCTGG
TCGATTTCGA TCCCGCTCGC GGTGCGGCTC GCGCCGAGCG ACCGCAAAAG CCGTGCGCTC
AGCCTGATCG CGATGGGCTC GGCGATCGCG ATGGTCGCCG GGATTCCGCT CGGACGCATG
ATCGGCGAGG CGTTCGGCTG GCGCGTCACG TTCCTGATCA TCGCGGGCAC GGCGGGCATC
GCGCTGCTGT TGCTGCGCGC CACGTTGCCG TTGCTGCCGA GCCAGGGCGC TGGGTCGCTG
AGCAGCATCG GCGTGTTCCT GCGCAAGCCA GCGCTGGTCG CGCTGTATGC GATCACCGTG
CTGGTCGTAT CCGCGCACTT CACGTCGTAC ACGTACATCG AACCGTTCGT GCAGAGCATC
AATCATGCGA GCAACAGCCG GATCACGTAC GTGCTGATCC TGTTCGGCAT CGCCGGGCTG
CCGGCCGCGG TCTGCTTCAA TCGCGTCTAC CCGCACCGGC CCGACGATTT CCTGCTGGCG
TCGATCGTCG CGCTGTCGGG CTGCCTGCTG ATCCTGTTCC CGTGCGCGCT GAACATCGTC
ACGCTGTCCG TGCACACGCT GGTGTGGGGC GGCGCGATCG TCTGTTTCGG GCTGGCGATG
CAGGCATGGG TGCTGAAGCT GGCGCCGGAC GCGACCGACC TGGCCGTGTC GATCTACTCG
GGGCTGTACA ACGTCGGCAT CGGCGCCGGC GCGCTGCTCG GCAACCATAT CGCGGGCGAC
TTCGGGCTGC CGTGGATCGG CACCTTCGGC GGCGTGGTCG CGATCTTCGC GGCCGGTGTC
GCGTGGGCCG CGTTGCGGCT GCACGCGAAA CGGGAAGCGG CGCTCGCGGC CCACGCGCCT
TGA
|
|---|
| Protein sequence | MATPDAVSSE QSWWGVLALA LTAFIFNTTE FVPVALLSAI GDSLQMQPTA VGLMLTIYAW
AVAVVSLPLT FVTRHVERRK LLSVALLVFI GSHVVTGVAW NFTVLMIGRL GIACAHAVFW
SISIPLAVRL APSDRKSRAL SLIAMGSAIA MVAGIPLGRM IGEAFGWRVT FLIIAGTAGI
ALLLLRATLP LLPSQGAGSL SSIGVFLRKP ALVALYAITV LVVSAHFTSY TYIEPFVQSI
NHASNSRITY VLILFGIAGL PAAVCFNRVY PHRPDDFLLA SIVALSGCLL ILFPCALNIV
TLSVHTLVWG GAIVCFGLAM QAWVLKLAPD ATDLAVSIYS GLYNVGIGAG ALLGNHIAGD
FGLPWIGTFG GVVAIFAAGV AWAALRLHAK REAALAAHAP
|
|---|
| |