| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6088 |
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| Symbol | |
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| ID | 6125063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 75876 |
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| End bp | 79268 |
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| Gene Length | 3393 bp |
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| Protein Length | 1130 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641647107 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001773704 |
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| Protein GI | 170734590 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.984614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCCA CACCACCGTT CGCTCCCCAC CTCTACTTCT GCGACGCCCG CCTCGTCGGG
CCGCTCGACG TGTGGCCGCA AACCTTCGCG CATATCGCGG GGATGGGCTT CGATCACGTG
CTGGTCGGCG CGTTCTGGGC CGCGAGTGTG GCCGGCTTTC CGCGCCACGT GGCCGATTTC
CGGCGGCCGG CCCAGTCGTT CGAGACACGC GCGAGCGCGC TCGAAACCTT CTCGCGGCTC
GCGCAACTGG CGAAGGGCCA CGGGCTGCGC CTGCTGCTCG AAGTCGTACC CGACCGCATC
GCGCGCGACA ACCCGCTGCG CGCCGAGCAT CCGGACTGGT ATGTCGAGCG CACGCACGAC
GATGCGCTGA TCGATCCGCG CGGCACCGCG CACGCACTGG ATATCGCGCA TGCGAACACC
GCCGACGAAG CGGTGCGCGA CGCGCTGTCG GCATGGTGGT GCGCGCATCT CGCGACGTAC
GCCGACGCGG GCGCGGCCGG CTTCCTGATC GACGCGCCGC ATCACCTGCC GGCGGACTGG
TGGCCGGGAT GGCGCGCGGC GCTGCGCCGT GCGCGCCCGG ACGTCGCGGT GCTCGCCGGG
GTGCCCGGCC ATGCGCGCGA CGCGCTCGCG CAGCTCGAAG CCGCCGGCTT CGACGCGGTG
TTTTCATCGG TGCGCTGGTG GGACCTGCGC GCGCCGTGGT TCGCGGACGA GCACCGGCTG
CTGCGCCGCA TCGGCGCGCC GATGGCGTTT CCCGATGCGC CCGACGGCCC GCGTCTGGCC
GACGACTGGC CCGACGCGCC GGACGACACC GTCGCCCGCG CGTATCGCCG CGCGCTGTGG
ACGGCCGCGG CCGTCGGCAC CGGCTGGCTC GTGCCGATGG GCTTCGAGCG CGGCGTGACG
GTGCCGTTGA TGGCGCGCGA CGCGGACGCC GCGCGCTACC TCGCCGCGTT CGAGCACGCG
CGTTTCGACT TGTCGGGCGC GCTCGCCGAC GCGAACGCGT GGCGCCGCGC CACGCCCGTG
GCGGCAGCGC GCGGTGAAAT CGTGCAACTG AGCGCGCCGG GCGCGAGCGC GACCGCGCTG
CTGCGCGGCA CCGGGCCGCT GCTCGAACAC GACGACGCGG CGTTGCTGAT CACACTGAAT
CCCGATCTCG ACGCGCCGGC GACGGTCGAC CCCGCGACGA TCCTGCCCGG CGTGCCGGGC
GGCTTCACGC GCGTCGTCAC GCAGGACGGC GCGCACACGC ATCCGCCGGC GGCGCTCGAG
CCGTTCACGC TCGCCCCCGG CGCGTATGCG CTGCTGCATG CATGGCGGCC GCCGCCCGTC
ACGACGCGCG CCGACGCCGC GCGCGAACGC GCCGCGCTGT CGGCCGCGCT CGTGGCCGAC
CGGATCGCGA TCGAGCGCGT CGAGCCGTCG GTCGACGACG GCCGCTTCGC GATCAAGCGC
GTGATCGGCG AGCCGCTGGT CGTCAGCGCG TCGATCTTCA CGGACGGGCA CGCGCATCTG
GCGGCCGTGC TCCAGTGGCG CGCCGCCGAC GACGACACCT GGCGCGAAGT GCCGTTCGAA
GCCGAGCCGA ACGACCGCTG GCACGCACGC GTCACGCTCG ACCGGCTCGG CCGCCATGAA
TTCCGCGTGG TCGCGTGGCG CGACGACTGG GCGTCGCTCG TCACCGATAT CGCGAAGAAG
CGCGCGGCCG GCCAAGACGT GACGCTGGAG GTGCGCGAAG CGCAACTGCT GCTCGCCACC
GCGTTGAAGC TCGCCGATCC CGTCGATCCG CGCGCGGTCA AGCAGATGGA GCGGCTCGCC
GCCGAGCTCA AGGACGCGTC GGCCGACGAC CGCCTCGCGC TGATCGGCGG GCCCGCGCTC
GCCGACGCCT TCGCGGCGCT GCGCTACCGC CCGTTCGTCA CGCACGACGC GACGACCTAC
CCGGTCGACG TCGAACGCCG CCAGGCGCGC TTCTCGAGCT GGTACGAGAT GTTTCCGCGC
TCGGCGAGCG ACGATCCGCA CCGGCACGGC ACGTTCGACG ACGTGATCGC GCATTTGCCG
CGCATCCGCG ACATGGGTTT CGACGTGCTG TATTTCCCGC CGATCCACCC GATCGGCACG
TCCGCGCGCA AGGGCCGCAA CAACAGCCTG ACCGCCGGCC CCGACGACGT CGGCAGCCCG
TACGCGATCG GCTCGCCCGA CGGCGGCCAT ACGGCCGTGC ATCCGCAGCT CGGCACGCTC
GAGTCGTTCC GCGCGCTGGT CGATGCCGCG CGCGGGCACG GGCTCGAGAT CGCGCTCGAT
TTCGCGATCC AGTGCTCGCC CGACCATCCG TGGCTCGCCG CGCATCCGGG CTGGTTCGCG
TGGCGGCCCG ACGGCTCGCT GCGTTTCGCG GAGAATCCGC CGAAGCGCTA TCAGGACATC
GTCAACCCCG ATTTCTACGC GCCGGACGCG CTGCCCGACC TGTGGCTCGC GCTGCGCGAC
GCGGTGCTGT TCTGGGTCGA CGCGGGCGTG CGGATCTTCC GCGTCGACAA CCCGCATACG
AAGCCGCTGC CGTTCTGGGC GTGGATGATC GCCGACGTGC GCGGCCGGCA TCCGGACGTC
GTGTTCCTGT CCGAGGCGTT CACGCGGCCG GGGATGATGT ACCGCCTCGC GAAAGTCGGC
TTCTCGCAGT CGTACACGTA CTTCACGTGG CGCGAGTCGA AGCGCGACTT CATCGACTAC
CTGACCGAGC TGACGGCCGG CCCGCCACGC GAATTCTTCC GGCCGAACTT CTTCGTCAAC
ACGCCCGACA TCAATCCGCG CCACCTGCAG AACGCGCCGC GTTCGCAGTT CGTGATCCGC
GCGGCGCTCG CGGCGACGCT GGCCGGCTCG TGGGGCCTGT ACTCGGGCTT CGAGCTCGGC
GAATCGGCGC CGCTGCCGGA CAGCGAGGAA TACGCGGATG CCGAGAAATA CGAGCTGCGC
GCGCGCGACT GGAGCAAGGC CGCGCACATC GGCACGGAAA TCGCGCGGCT GAACCGCGCG
CGGCGCGATC ACGCCGCGCT GCAGACGCAT CTCGGGCTCA CGTTCGTCGA GGCCGACAAC
GATTCGGTGC TCGTGTTCAT GAAGGCGACG CCGGCGTTCG ACAGCGTGGT GATCGTCGCG
ATCAGTCTCG ACCCGTGGCA TCCGCAGGCC GCGAACTTCA CGCTCGATGC GGCGCTGTGG
CGCGGCCTCG GGCTGGCCGA CGGCGAACCG CTCGATGCGC TCGAACAGGA CGCCGCGCAT
GCGGAAACCT GGCGCGGCCA TCGTCAGTAC GTGTCGCTCG ATCCGCACGT GCGGCCGTAT
GCAATCTGGC GGCTCGCGCC GTCTCCGGGC GCCGCGCGGG CGGCGGCACC CGAACCGGAC
TCCGCCCGCC GCCCTTCGGG AGCGCATGCA TGA
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| Protein sequence | MDSTPPFAPH LYFCDARLVG PLDVWPQTFA HIAGMGFDHV LVGAFWAASV AGFPRHVADF
RRPAQSFETR ASALETFSRL AQLAKGHGLR LLLEVVPDRI ARDNPLRAEH PDWYVERTHD
DALIDPRGTA HALDIAHANT ADEAVRDALS AWWCAHLATY ADAGAAGFLI DAPHHLPADW
WPGWRAALRR ARPDVAVLAG VPGHARDALA QLEAAGFDAV FSSVRWWDLR APWFADEHRL
LRRIGAPMAF PDAPDGPRLA DDWPDAPDDT VARAYRRALW TAAAVGTGWL VPMGFERGVT
VPLMARDADA ARYLAAFEHA RFDLSGALAD ANAWRRATPV AAARGEIVQL SAPGASATAL
LRGTGPLLEH DDAALLITLN PDLDAPATVD PATILPGVPG GFTRVVTQDG AHTHPPAALE
PFTLAPGAYA LLHAWRPPPV TTRADAARER AALSAALVAD RIAIERVEPS VDDGRFAIKR
VIGEPLVVSA SIFTDGHAHL AAVLQWRAAD DDTWREVPFE AEPNDRWHAR VTLDRLGRHE
FRVVAWRDDW ASLVTDIAKK RAAGQDVTLE VREAQLLLAT ALKLADPVDP RAVKQMERLA
AELKDASADD RLALIGGPAL ADAFAALRYR PFVTHDATTY PVDVERRQAR FSSWYEMFPR
SASDDPHRHG TFDDVIAHLP RIRDMGFDVL YFPPIHPIGT SARKGRNNSL TAGPDDVGSP
YAIGSPDGGH TAVHPQLGTL ESFRALVDAA RGHGLEIALD FAIQCSPDHP WLAAHPGWFA
WRPDGSLRFA ENPPKRYQDI VNPDFYAPDA LPDLWLALRD AVLFWVDAGV RIFRVDNPHT
KPLPFWAWMI ADVRGRHPDV VFLSEAFTRP GMMYRLAKVG FSQSYTYFTW RESKRDFIDY
LTELTAGPPR EFFRPNFFVN TPDINPRHLQ NAPRSQFVIR AALAATLAGS WGLYSGFELG
ESAPLPDSEE YADAEKYELR ARDWSKAAHI GTEIARLNRA RRDHAALQTH LGLTFVEADN
DSVLVFMKAT PAFDSVVIVA ISLDPWHPQA ANFTLDAALW RGLGLADGEP LDALEQDAAH
AETWRGHRQY VSLDPHVRPY AIWRLAPSPG AARAAAPEPD SARRPSGAHA
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